Gene Tgr7_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1175 
Symbol 
ID7315426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1264485 
End bp1265093 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID643616062 
ProductRibonuclease H 
Protein accessionYP_002513248 
Protein GI220934349 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCTGG AGGCCTGGCT GGGGTTGCCC GGGGTGGCGG GCGTGGACGA GGTGGGCCGG 
GGTCCGCTGG CGGGTCCGGT GGTGGCCGCA GCGGTGATCC TGGACCCGGC GAGACCCATC 
GATGGACTCA AGGATTCCAA GAAACTGAGC CCTGCACGCC GGGAGGCCCT GGACGTGCAG 
ATCCGCGAGC GCTCCCTGGC CTTTGCCCTG GGGCTCTGCA CCCCGGCGGA GATCGACCGC 
ATCAACATCC TGCAGGCGAG CCTGCTGGCC ATGCAGCGGG CCGTGGAGGC CCTGTCGCAC 
CGCCCCGAGA TGGCCCTGGT GGATGGCAAT CGCTGCCCGA AACTCACCAT GACCGCCCAC 
GCGGTGATCA AGGGCGACAG CCGGGTGCCG GCCATCAGCG CTGCCTCGAT CATCGCCAAG 
GTGCACCGGG ACCGGCTGAT GCTGGCACTG GACGAACAAC ACCCGGGCTA TGGGCTGGGC 
TCGCACATGG GTTACCCGAC CCCCGTGCAC CTGGAGGCCC TGGAGCGCCT CGGTCCCAGC 
CCCTGCCACC GCCTGAGCTT CGCCCCGGTG CGCCGGGCGG CGGAGCGCAT GCAGGTTGCA 
CTGTTCTGA
 
Protein sequence
MDLEAWLGLP GVAGVDEVGR GPLAGPVVAA AVILDPARPI DGLKDSKKLS PARREALDVQ 
IRERSLAFAL GLCTPAEIDR INILQASLLA MQRAVEALSH RPEMALVDGN RCPKLTMTAH 
AVIKGDSRVP AISAASIIAK VHRDRLMLAL DEQHPGYGLG SHMGYPTPVH LEALERLGPS 
PCHRLSFAPV RRAAERMQVA LF