Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1167 |
Symbol | |
ID | 7315418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1255558 |
End bp | 1257834 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643616054 |
Product | outer membrane protein assembly complex, YaeT protein |
Protein accession | YP_002513240 |
Protein GI | 220934341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.190139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGAATC GTCTGAGAGT TGCCGTGGCC GGTGCGCTGC TGGCTGCCGG CATGGCCCAC GGGGCCACCT TCACCATCGA GGACATCGAG GTGGAGGGTC TGGAGCGCAT CGCTCCGGGC ACGGTGTTCA CCAATCTGCC GGTGCAGGTG GGCGATGCCT TCGACGATGC GCGCAGCGCC GAGGTGGTGC GCGCGCTGTT CCGTACCGGC TTCTTCTCCG ACGTCTCCCT GCGTCGCCGC GACAACGTGC TGGTGGTGGT GGTCGAGGAG CGTCCCGCCA TCAACGAGAT CAACATCAGT GGCAACCGTG ACATCAAGGA CGACGAACTC ATGGATGCCC TGCGCCAGGT GGGCATGGCC CGCGGACGGG TATTCAACCG CACCGTGCTC GAGCGCATGG AGAACGAGCT GCGCCAGCAG TACTACGCCC GCGGCAAGTA CAACGTGCGT ATCGACGTCG AGGTGGAGGA ACTGGAACGC AACCGCGTCG ACGTGAACAT CGACATCGCA GAGGGTCAGG TGGCCAAGAT CCGGCGCATC AACCTGGTGG GCAACGATGC CTTCGAGGAC AGGGAGATCC TGCGTCGTTT CGATTCCGGC ATCCCGCGCT GGTACGCCTT CTTCAGCCGC CGGGATCACT ACTCACGCCA GAAGCTCTCC GGTGACCTGG AGACCCTGCG TTCCAAGTAC CTGGACAGCG GTTTCGTCAA TTTCAACATC GATTCCACCC AGGTGACCCT GACCCCGGAC CGCAAGGACA TCTATGTCAC GGTCAACGTG GACGAGGGTG ACCAGTACAC CATCAGCGAC GTGCGCCTCG GTGGCAATCT CATTGTCGAC GAGCAGGAGC TGATGGAGCT GGTCCGGGTC GCGCCGGGGG ATGTGTTCTC CCGGGCGCGG ATCAATGCAT CCGCCGACGC CATCACCCGT CGCCTCGGCG ACGAGGGCTA TGCCTTCGCC AACGTCAATC CGATCCCCGA AGTGGATGAG GAGAACCGCA CCGTCAGCCT GACCCTGTTC GTGGATCCGG GTCAGCGGGT CTACGTGCGG CGCATCAACT TCACCGGCAA CGACCGCACC CAGGACGAGG TGTTCCGCCG CGAGATGCGC CAGATGGAAG GCGGCTGGTA CTCCACCTCC AACGTGGACC GTTCCCGGGT GCGCCTGCAG CGCCTGTCCT TCGTGGAATC GGTGAACGTG GAGACCCGGC GCGTGCCCGG CAGTGACGAC CAGGTGGATC TGGACATCAG TGTGAAGGAG CGCTTCTCCG GAAGCTTTAC CGTGGGCGTG GGCTACGCCC AGAGCGAAGG CGTGCTGTTC AACCTGGGGC TGTCCCAGGA GAACTTCATG GGCACCGGTC GGCGCGTGTC GCTGGCCTTC AACAACAGTT CGGTGAACCG CACCTACAGC ATCTCCTACC TGAATCCCTA CTACACCCTG GACGGCATCA GCCGTGGATT CACGCTGTTC TTCCGCGAGA CCGATGCCTC CCAGCTGGAT ATCTCCCGCT ATGCCACCAA CCGCTACGGC GGCACCCTGA CCTACGGCAT ACCGCTCACG GAATTCGACA CCTTCCGCTT CAGCCCCGGT TACGAACGCG TCGAGGTGGT GACCACGTCC GGCACCTCCG ACGAGGTCTT CGATTACATC GCAGACGGCA ACACCTTCAA TTTCTACACC CTGGAATCCT CGTTTACCCA CGACACGCGG GACCGCACGG TGTTCGCCAG CGAGGGCAAC CTGCAGCGGG CGGGGGTGAA GGTGGCCCTG CCGGGCAGCA CCGCCGAGTA CTTCAAGCTC GATCTGCGCA GCCAGTGGTT CCTGCCCCTG CGCGACAACC TGTCCATCGG GCTCAACGGC GAGATCAACT ACGCCGAACC CTATGGTGAC AATGACCGTG TGCCGTTCTT CGAGCATTAC TTCGCCGGCG GCTCGCGCTC GGTGCGCGGC TACCGGGACT TCAGTCTGGG CCCGCAGGAT TCCAACAACG ACCCGTTCGG CGGCACCTTC CGCGTGGTGA CCACCGCCGA GCTGCTGTTC CCGCCGCCAT TCCTGGACGA CAGCGGCAAC ATGCGCATGA GCCTGTTCCT GGATGCGGGT CAGGTCTACC AGAGTTACGA GGCCTTCGAT GCGGGCGAGA TCCGCACCTC GGCGGGTATC GGCATGACCT GGTTGTCCCC CGTCGGCGCG TTGACTTTCA GTCTGGCCCA AGCGTTAAAT GACAAGCCGG AAGATGACCG GCAGGTGTTC CAGTTCAGCA TCGGCGCGGC GTTCTGA
|
Protein sequence | MLNRLRVAVA GALLAAGMAH GATFTIEDIE VEGLERIAPG TVFTNLPVQV GDAFDDARSA EVVRALFRTG FFSDVSLRRR DNVLVVVVEE RPAINEINIS GNRDIKDDEL MDALRQVGMA RGRVFNRTVL ERMENELRQQ YYARGKYNVR IDVEVEELER NRVDVNIDIA EGQVAKIRRI NLVGNDAFED REILRRFDSG IPRWYAFFSR RDHYSRQKLS GDLETLRSKY LDSGFVNFNI DSTQVTLTPD RKDIYVTVNV DEGDQYTISD VRLGGNLIVD EQELMELVRV APGDVFSRAR INASADAITR RLGDEGYAFA NVNPIPEVDE ENRTVSLTLF VDPGQRVYVR RINFTGNDRT QDEVFRREMR QMEGGWYSTS NVDRSRVRLQ RLSFVESVNV ETRRVPGSDD QVDLDISVKE RFSGSFTVGV GYAQSEGVLF NLGLSQENFM GTGRRVSLAF NNSSVNRTYS ISYLNPYYTL DGISRGFTLF FRETDASQLD ISRYATNRYG GTLTYGIPLT EFDTFRFSPG YERVEVVTTS GTSDEVFDYI ADGNTFNFYT LESSFTHDTR DRTVFASEGN LQRAGVKVAL PGSTAEYFKL DLRSQWFLPL RDNLSIGLNG EINYAEPYGD NDRVPFFEHY FAGGSRSVRG YRDFSLGPQD SNNDPFGGTF RVVTTAELLF PPPFLDDSGN MRMSLFLDAG QVYQSYEAFD AGEIRTSAGI GMTWLSPVGA LTFSLAQALN DKPEDDRQVF QFSIGAAF
|
| |