Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1166 |
Symbol | |
ID | 7315417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1254185 |
End bp | 1255549 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643616053 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_002513239 |
Protein GI | 220934340 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.351032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATCC TGATCAGCAT TGCCGCCTTC GTCGTCGCCA TCGGCGTCCT GGTGACCGTG CACGAATACG GCCACTACTG GGTGGCCCGG CGCGCGGGCG TGAAGGTTTT GCGATTCTCG GTGGGCTTCG GGCGTCCCCT GTGGCGCAGG GTGGCCGGCG CCGATCGCAC CGAGTACGTG ATTGCCGCCA TCCCTCTGGG CGGTTACGTC AAGATGCTGG ACGAGCGCGA TCCGGACACG CCGCCGGGCG AGGATCTGTC CCGGGCCTTC AACCGCCAGC CGGTGGGCAA GCGCATCGCC ATCGTGGCGG CGGGTCCGGC CTTCAATTTC CTGTTCGCCA TCCTGGCCTA CTGGCTGATG TTCATGGTGG GCATCGGCGG CGTGAAGCCG GTGGTGGGCG AGGTGGCACC CGCGTCCCTG GCCGCCGAGG CGGGCTTCGT CAGTGGCGAC CGGCTGATCT CCGTGGCCGA TACCGAGACG CCCACCTGGG AACTGGCTTC CCTGGCACTG CTGGAGCGCA GCCTCGACTC CCAACGGGTG GCCGTGCGGG TGGAGACCGC CGACGGGCGC GAGTTCGTGC GTTGGCTGGA CCTGAGCGAC ACCCGCCGGC TGCTGGATGA GGGTCCGCTC CTGGACAAGA TCGGCATCAC CCCCTGGCGT CCGCGCCTGG ACCCGGTGCT GGGCGAGCTG GTCTCCGGCG GGCCGGCAGT CCAGGCCGGG CTGCAGAGCG GTGACCGGGT GCTTGCGGCG GACGGCGAGC CCGTGCACAC CTGGCAGGGC CTGGTGGAGC ACATCCAGGC CCGGCCCGAC GGCATGATGC AGCTGGAGGT GGAGCGCGAC GGCAGCCGCC TGCAGGTGGC CGTGCGTACC GGCAGCCGCG AGGACAACGG GCGCATCGTG GGCATCATCG GCGCCTATCC CCACGTGGAC ACCAGCCAGT TCGAGGCCAT GCGCACCACG GTGCGTCACG GCCCCGTCGA GTCCTTCGTC AACGGTGTGA CTCGCACCTG GGACATGACC GTGCTCACCC TGCGGGTGCT CTGGCGCCTG GTGATGGGCG AGGCCTCGGT GAAGAACATC AGCGGGCCCA TCAGCATCGC CGAATACGCG GGCGTCACCG CCGTGATCGG TGTGGCCGCA TTCCTGGGTT TCATGGCCAT CGTCAGTATC AGTCTCGGCA TCATCAACCT GCTGCCCATC CCCATGCTGG ATGGCGGACA CCTGCTCTAC TACCTGGTGG AGATCGTCAA GGGCAGCCCC GTCTCGCCCC AGGTGGAGGC CATCGGCCAG CGGGTGGGGC TGGTGATGAT CGCGCTGCTG ATGACCCTCG CCTTCTACAA CGACATCATG AGAATACTGG GCTGA
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Protein sequence | MSILISIAAF VVAIGVLVTV HEYGHYWVAR RAGVKVLRFS VGFGRPLWRR VAGADRTEYV IAAIPLGGYV KMLDERDPDT PPGEDLSRAF NRQPVGKRIA IVAAGPAFNF LFAILAYWLM FMVGIGGVKP VVGEVAPASL AAEAGFVSGD RLISVADTET PTWELASLAL LERSLDSQRV AVRVETADGR EFVRWLDLSD TRRLLDEGPL LDKIGITPWR PRLDPVLGEL VSGGPAVQAG LQSGDRVLAA DGEPVHTWQG LVEHIQARPD GMMQLEVERD GSRLQVAVRT GSREDNGRIV GIIGAYPHVD TSQFEAMRTT VRHGPVESFV NGVTRTWDMT VLTLRVLWRL VMGEASVKNI SGPISIAEYA GVTAVIGVAA FLGFMAIVSI SLGIINLLPI PMLDGGHLLY YLVEIVKGSP VSPQVEAIGQ RVGLVMIALL MTLAFYNDIM RILG
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