Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1153 |
Symbol | |
ID | 7315862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1240159 |
End bp | 1241355 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643616040 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_002513226 |
Protein GI | 220934327 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCCG ATCTGGACCG TCTGCAGCCC TATCCCTTCC AGAAACTCAC GGAACTGAAG GCGGGGATCA AGCCACCGGC GCACCTGGAA CACATCGCCC TGTCCATCGG CGAACCCAAG CACCCCACCC CGGGCTTCAT CGCCGAGACC CTGGCCAGCC ACCTGCACGG CCTGGCCCAC TACCCCATCA CCCGCGGCGG TGATGCCCTG CGCGAGACCA TCGCCGCCTG GGCCACCCGG CGCTTCGACC TGCCCGCCGG CAGCCTGGAC GCGGCACGCC ACGTGCTGCC GGTCACCGGC ACCCGGGAGG CCCTGTTCGC CTTCGCCCAG TGCGTGGTGG ACCGCAGCCG CGACCCGCTG GTGCTGATGC CCAACCCCTT CTACCAGATC TACGAGGGCG CGGCCCTGCT GGCGGGCGCC GAGCCCCATT TCCTGAACCT GAGCGCGGAC AACCGCTTCC TGCTGGAGCT GGACGCGGTG CCGGATGCCG TCTGGAATCG CTGCCAGCTG CTGTATCTGT GCAACCCCGG CAATCCCAGC GGCGCGGTGA TGGACGAGGC CCACCTGCGC CAGGCCATCG AACTGGCGGA GCGCTTCGAC TTCGTGATCG CCGCCGACGA GTGCTATTCC GAGATCCACT TCCCGGGCGC CACCCCGCCC CCGGGCCTGC TGGGCGCCGC CGCGCGCATG GGCAACACCG ACTACCGGCG CTGCGTGGTG TTCCACAGCC TGTCCAAGCG CTCCAACGTG CCCGGCCTGC GCTCCGGCTT CGTGGCCGGC GACGCGCAGA TCCTTGAGCG CTTTCACCTG TATCGCACCT ACCACGGCTG CAGCATGGCC CCGCCCAGCC AGGCGGCCAG CACCGCCGCC TGGGCCGACG AGGCCCACGT GGAGGAGAAC CGCCAACTGT ACGCGCAGAA GTTCGACGCC ATGCTGGAGA TCCTCGGCGA CGTGCTCAAG GTCTCGCGCC CGGACGCGGG CTTCTACCTC TGGCCCGAGA CCCCGGTGGA CGACCAGACC TTCGCCCGGG AGCTGTTCGG GCAGCAGAAC GTCACCGTGC TGCCGGGCAG CTATCTCTCC CGGGACACCG AGGCCGGCAA TCCGGGACGC AACCGGGTGC GCATGGCCCT GGTGGCCCCC CTGGACGAAT GCATCGAGGC CGCCGGACGC ATCCGCCGCT TCGTGGAATC CCTTTGA
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Protein sequence | MNPDLDRLQP YPFQKLTELK AGIKPPAHLE HIALSIGEPK HPTPGFIAET LASHLHGLAH YPITRGGDAL RETIAAWATR RFDLPAGSLD AARHVLPVTG TREALFAFAQ CVVDRSRDPL VLMPNPFYQI YEGAALLAGA EPHFLNLSAD NRFLLELDAV PDAVWNRCQL LYLCNPGNPS GAVMDEAHLR QAIELAERFD FVIAADECYS EIHFPGATPP PGLLGAAARM GNTDYRRCVV FHSLSKRSNV PGLRSGFVAG DAQILERFHL YRTYHGCSMA PPSQAASTAA WADEAHVEEN RQLYAQKFDA MLEILGDVLK VSRPDAGFYL WPETPVDDQT FARELFGQQN VTVLPGSYLS RDTEAGNPGR NRVRMALVAP LDECIEAAGR IRRFVESL
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