Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1138 |
Symbol | |
ID | 7315847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1225308 |
End bp | 1226603 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643616025 |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_002513211 |
Protein GI | 220934312 |
COG category | [C] Energy production and conversion |
COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGA CCCGGACCAT TGAGGTCAAC GCCCTGGCCC GGGTGGAGGG CGAGGGCGCC CTGTACGTGC GCACCGAGGG CGAGCGGGTG GCGGAGGTGA AGCTCAGGAT CTACGAGCCG CCGCGCTTCT TCGAAGGTTT TCTCATCGGC CGGGATTTTC GCGAGGCCCC GGACATCACC GCGCGCATCT GCGGCATCTG CCCGGTGGCC TACCAGATGG GCGCCTCCCA GGCCATTGAG CAGGTCTGCG GGGTGAGCCT GGACCCGGCC CTGGAGGACC TGCGCCGGCT GATCTACTGC GGCGAGTGGA TCGAAAGCCA CGGCCTGCAC GTGTTCATGC TGCACCTGCC GGATTTCCTC GGCTACCCGG ACGGCATCAC CATGGCGCGG GATCACCCGG AACTGGTGCG CAACGCCCTG CGCATCAAGA AGATCGGCAA TGCGCTCATG CGCCTGGTGG GCGGCCGGGA GGTGCATCCG GTGAACCTCA AGGTGGGCGG CTTCTACCGC GCACCCACGC CGGCGGAGGC GGCGGCCCTG CGCGAGGACC TGGCCTGGGG ACTCGAGGCC AGCGCCGAGG CCCTGGACTT CCTGGCAGGA CTGGACTTTC CCGATTTCGA GATGGACTAC GAATTCGTGT CCCTGGTGCA TCCGGACGAG TACCCCATCC TGCACGGACG GCTTGGGTCC ACCAGCGGCA TCGACGCGCC GGTGGAGGAC TACGACCGGA TCTTCACCGA GACCCACGTG ATCCACTCCA ACGCCCTGCA CAGTCACCTG AGCGAAACGG GGCGCCCCGC CTGCCTGGGT CCTCTGGCCC GCTTTGCCCT CAACCGGGAG CGGCTCACCC CCCGCGCCGC GGCCCTGGCG GAGAAGGCCG GACTCGGGGC CGTGTGCCGC AACCCCTTCA AGAGCATCCT GGTGCGCATG GTGGAGATCG CCTTCGCCTT CGAGGAGGCC CTGCGCCTGG TGGATGCCTA CCAGGCCCCG GCCCGGCCGG CGGTGGACAT GACGCCCCGC GCGGGCACCG GCTACGGTGC CACCGAGGCG CCCCGGGGCA TCTGCTACCA CCGCTACACC CTGGACGAGG CAGGCATCAT CCGGGACGCC AAGATCGTCG CCCCCACCTC GGTGAACCAG CCCAGCATCG AGGCGGACCT GCACGGCTTC GTGCAGGATA ATCTGGACCT GCCCGATGAC CAGCTGCGCC ACCGCTGCGA ACAGGTCATT CGCAACTACG ACCCCTGCAT CTCCTGCGCC ACCCACTTTC TCGATCTCAC CGTGGAACGG GGATGA
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Protein sequence | MSQTRTIEVN ALARVEGEGA LYVRTEGERV AEVKLRIYEP PRFFEGFLIG RDFREAPDIT ARICGICPVA YQMGASQAIE QVCGVSLDPA LEDLRRLIYC GEWIESHGLH VFMLHLPDFL GYPDGITMAR DHPELVRNAL RIKKIGNALM RLVGGREVHP VNLKVGGFYR APTPAEAAAL REDLAWGLEA SAEALDFLAG LDFPDFEMDY EFVSLVHPDE YPILHGRLGS TSGIDAPVED YDRIFTETHV IHSNALHSHL SETGRPACLG PLARFALNRE RLTPRAAALA EKAGLGAVCR NPFKSILVRM VEIAFAFEEA LRLVDAYQAP ARPAVDMTPR AGTGYGATEA PRGICYHRYT LDEAGIIRDA KIVAPTSVNQ PSIEADLHGF VQDNLDLPDD QLRHRCEQVI RNYDPCISCA THFLDLTVER G
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