Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1092 |
Symbol | |
ID | 7315801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1175628 |
End bp | 1176314 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643615979 |
Product | Ribonuclease III |
Protein accession | YP_002513165 |
Protein GI | 220934266 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.268595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGGA TTCCGCTTCA CGATCTCCTG CCCGAGGGGC TGCACGATTC CGAACTGCTC ACCGAGGCGC TCACACACCG CAGCGCCGGG AGCCCCAACA ACGAGCGCCT GGAATACCTG GGTGACGCGG TGCTGGGCAT GGTGATGGCG GAGCATCTGT TCAAGGCCCA CCCGGAGGCC AGCGAGGGTG ACCTCAGCCG GCTTCGCGCC ACCCTGGTGA ACAAGGACAG CCTGGCCGTG ATCGGCAAGG CCCAGGGCCT TGGCGGGCAC ATCAACCTGG GCCAGGGGGA GCTGAAAAGC GGCGGCGCCC GGCGCAACTC CATCCTGGCC GATGCGGTGG AGGCGGTGAT CGGCGCGGTC TACCTGGACA GCGGTTTCGA TGCCGCGCGG CGTTTCGTGC TGGCGCTCTA CGCTGATCGG CTGGAGAGTC TGCCCGCGCT GGACGCCCTC AAGGATCCCA AGACCCGGCT CCAGGAATGG CTGCAGGGCC GCAGCCGGGA ACTGCCCGTC TACGAGGTCA CCTCCGTGAC CGGCAAGGCC CACGAGCAGC GTTTCCGCGC CCTGTGCCGT GTGGGGGACC AAGAGTACCC GGGTGAAGGC ACCAGCCGTC GGCGCGCCGA GCAGGCCGCG GCGGAATGCG CATTGAAGGC GCTGGAGACC AGTGGCAAGA GGCAAGAGGC AAGTTGA
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Protein sequence | MSRIPLHDLL PEGLHDSELL TEALTHRSAG SPNNERLEYL GDAVLGMVMA EHLFKAHPEA SEGDLSRLRA TLVNKDSLAV IGKAQGLGGH INLGQGELKS GGARRNSILA DAVEAVIGAV YLDSGFDAAR RFVLALYADR LESLPALDAL KDPKTRLQEW LQGRSRELPV YEVTSVTGKA HEQRFRALCR VGDQEYPGEG TSRRRAEQAA AECALKALET SGKRQEAS
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