Gene Tgr7_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1086 
Symbol 
ID7315795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1170351 
End bp1170824 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content72% 
IMG OID643615973 
Productpositive regulator of sigma E, RseC/MucC 
Protein accessionYP_002513159 
Protein GI220934260 
COG category[T] Signal transduction mechanisms 
COG ID[COG3086] Positive regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.284991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGG AGCAGGCCCG GGTCATCAGC GTCGAACAGG GCCATGCCTG GGTGGAGACC 
CAGCGCCGTT CCACCTGCGG CAGCTGCGCC GCCAACAAGG GTTGCGGCAC CTCCGTGATC 
GCCAAGATGG TGGGCAACCG GCGCAGCCGG GTGCGCGCCA TCGACCCCGT CGGGGTGCGC 
CTGGGTGACG AGGTGGTGGT GGGCATCGAG GAGGCCGCCC TGGTGCGTGG CTCCCTGGCG 
GTCTACACCG TGCCCCTGAT CACCCTGCTG GTGGGTGCCC TGCTGGCCCG CTGGCTGTGG 
CCGGCGGCCG GTGAGCCGGT GGTGGTGTTG AGCGGCCTGG CGGGACTGGC CGCGGGACTG 
GTGTGGCTGC GGCTGTTTGC CGGCCGGGTC AGTTCCGATC CCCGCTACCA GCCCGTGATC 
CTGCGCCGCC TGCACAGCCT GCATCCCCGC GCCAATGGTG TTTTGGCCCC CTGA
 
Protein sequence
MIEEQARVIS VEQGHAWVET QRRSTCGSCA ANKGCGTSVI AKMVGNRRSR VRAIDPVGVR 
LGDEVVVGIE EAALVRGSLA VYTVPLITLL VGALLARWLW PAAGEPVVVL SGLAGLAAGL 
VWLRLFAGRV SSDPRYQPVI LRRLHSLHPR ANGVLAP