Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0959 |
Symbol | |
ID | 7314990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1036734 |
End bp | 1038041 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643615844 |
Product | putative methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_002513034 |
Protein GI | 220934135 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.802001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCTGA ACAAGCGCTT GCACAACGAA CTGGCCGAAT GTCGACAGGC CCTGGCCGAG ACCCGCTTCG CATTCGATGC CATCCGGGCC TCGGTGGCCT ACATTGAATT CACGCCAGAT GGACAAATCC TGGATGTGAA CGAGCAGTTC CTGGCCGCCA CGGGCCACAC CCGGGAGGTC GTGCTTGGCG CCCATCATCG CCTGTTCTGT GACCCGTCCT ACGTCAAGTC CACCGAATAC AGGCAATTCT GGGAGCGGCT CGCCCGGGGC GAATCCCATG CAGGCACCTT CCCCCGCCGC AGGGCGGACG GCCGGCGCCT CTGGCTGGAA GCCACCTATT TCCCCGTCAG GGACGCCTCG GGCAGGGTCA CCCGGGTGAT CAAGATCGCC TCCGACGTGA CTGCCAAGCA GGAACAGCTG CGCGATCAGG CGGCCGTGTT CCAGGCCCTG GACCGGTCCA TGGCCGTCAT CTCCTTCACC CCCGAAGGCC AGATCCTGGA TGCCAATCGC AACTTCCTGG ATGCCGTGGG TTATCGGCTG GACGAGGTCC GCGGACGACA TCACCGCATG TTCTGCGACG AGGCCTTCTA CCGCGATCAC CCCCATTTCT GGGAACAGCT TGCTGCCGGG GAATTGATGA CCGGCAAGTT CCGCCGGCTG CGTTCCGATG GCCGCGAGCT CTGGCTCGAG GCCAGCTACA ACCCGATCCT GGACGAACAG GGCAGGACCG TGAAGGTGAT CAAATTCGCC ACCGACATCA CCGAAAGCGT CGACGCCGCC AACAAGATCC GCGACGCATC CGCCGTGGCC TACTCCACGG CACAGCAGAC CGCCGACAAC GCCGGACGGG GCTACACGTC CCTGCTCGCC TCTGTGGAAA ACTCGGAACA GATCCGCGCG CTCATCGATG AGGCCAAGCG CGCCATCCAC GACCTCAACA GCCAGTCCAA GAACATCGAG ACCATCGTCG CCACCATCAG CAGCGTCGCC TCCCAGACCA ACCTGCTGGC GCTCAACGCC GCCATCGAGG CGGCCCGCGC CGGCGAGCAT GGGCGCGGAT TCGCCGTGGT GGCCGACGAG GTCCGCCAGC TGGCCGCCCG CACCAGCACC GCCACGGAGG AAATCACCCG CGTACTCCAG GGCAATCTCC AGTACACCAC GGAGATCGTC ACACGCATCG AGAACGTCAG CGAGGCCGCG GAAAGGGGTC GTCAGCAGGT CATCTCCGCA GGCACCCTGG TGGATGAGAT CCGCAGCGGT GCCACCCACG TGGTGGACCT GGTGTCCTCG ATTCCCAGGG TGGCGTGA
|
Protein sequence | MILNKRLHNE LAECRQALAE TRFAFDAIRA SVAYIEFTPD GQILDVNEQF LAATGHTREV VLGAHHRLFC DPSYVKSTEY RQFWERLARG ESHAGTFPRR RADGRRLWLE ATYFPVRDAS GRVTRVIKIA SDVTAKQEQL RDQAAVFQAL DRSMAVISFT PEGQILDANR NFLDAVGYRL DEVRGRHHRM FCDEAFYRDH PHFWEQLAAG ELMTGKFRRL RSDGRELWLE ASYNPILDEQ GRTVKVIKFA TDITESVDAA NKIRDASAVA YSTAQQTADN AGRGYTSLLA SVENSEQIRA LIDEAKRAIH DLNSQSKNIE TIVATISSVA SQTNLLALNA AIEAARAGEH GRGFAVVADE VRQLAARTST ATEEITRVLQ GNLQYTTEIV TRIENVSEAA ERGRQQVISA GTLVDEIRSG ATHVVDLVSS IPRVA
|
| |