Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0917 |
Symbol | |
ID | 7315942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 988894 |
End bp | 989559 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643615795 |
Product | protein of unknown function DUF1568 |
Protein accession | YP_002512992 |
Protein GI | 220934093 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAGGA TCGGTCGTGT AGTCATTCCC GGGTATCCGC ATCATGTGAC CCAACGGGGT AACCGCCGCC AGCGGGTCTT TTTTTCCGAG ATGGATTTTC ACTATTACAT CGAACTCATG GCGGAGTTCA CCGAAGCAAC CCAAACAGAG ATTTGGGCCT ACTGTCTGAT GCCTAACCAC GTTCATCTCG TGATGGTTCC ACAGCATGAG GATGGCTTGC GCGCTGCTCT TGGCGAGGTG CATCGCCGTT ACACGCGCCG CATCAACTTT CGCAATGGAT GGCGGGGACA TCTTTGGCAG GAGCGCTTTC ACTCATTTGT CATGGATGAG CAGTACCTGC TTGCGACGGT TCGCTATGTC GAGCTCAACC CGGTGAAGGC CGGGCTTTGT CGACAGCCTG CCGACTGGCG CTGGTCGAGT GCGTTGGCCC ACATGGAAGG TCAGGATGAC CGCCTGGTCA AGGTGCAGCC GATGATCGAC AGGGTCGGCG ACTGGTCGGC CTATCTTTCC CATGACCCGG TTGAAGAGCA TGAGCACATC GCTCGACACA CCCGCACCGG AAGGCCACTC GGTAGCGCGG CCTTCGTAGA ACAACTCGAA GCGCTTACCG GAAAGTCATT GGCGCCGAAA CGCCCCGGAC GTAAGGCTCG TCGGGAAACG AAATAG
|
Protein sequence | MARIGRVVIP GYPHHVTQRG NRRQRVFFSE MDFHYYIELM AEFTEATQTE IWAYCLMPNH VHLVMVPQHE DGLRAALGEV HRRYTRRINF RNGWRGHLWQ ERFHSFVMDE QYLLATVRYV ELNPVKAGLC RQPADWRWSS ALAHMEGQDD RLVKVQPMID RVGDWSAYLS HDPVEEHEHI ARHTRTGRPL GSAAFVEQLE ALTGKSLAPK RPGRKARRET K
|
| |