Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0879 |
Symbol | panB |
ID | 7315902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 948203 |
End bp | 949018 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615758 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_002512957 |
Protein GI | 220934058 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAC ACAGCCCACA GACCCGCATC ACCACCCGCC GCCTGCAGGA GATGCGCGCC AGCCGCACCC CCATCGCCTG CCTGACCGCC TACGACGCGG GCTTTGCCGC CGTGCTGGAT GCGGCCGGCG TGGACGTGGT GCTGGTGGGG GATTCCCTGG GCATGGTGGT GCAGGGGCTG GAAACCACCG TGCCCGTGAC CCTGGAACAC ATGATCTACC ACACGAGCCT CGCCGCCCGG GGCACCCGGC GCGCCCTGCT CATGGCGGAC ATGCCCTTCA TGAGCTACGC CAGCCCCGAA CAGGCCCTGG CCAATGCGGC GCGCCTGATA CAGGAAGGCG GCGCACAGAT GGTCAAGCTG GAAGGCGACG GCGCCCAGGA GGCGGTGGTG GCCAGCCTGT CGCGCCACGG CATCCCGGTG TGCGCCCACC TGGGCCTGCG CCCCCAGTAC ATCCACAAGC TGGGCGGCTA TCGGGTGCAG GGTCGGGACA GCCACGCCGC CGAACGCATG ATCCACGACG CCGTGGCCCT GCAGAACGCC GGTGCCGACC TGCTGCTGCT CGAATGCGTG CCCGCCCTGC TGGCCGCCGA GATCCGTGGC ATGGTGGATA TCCCGGTGAT CGGCATCGGC GCCGGGGTGG AGTGCGACGG GCAGATCCTG GTACTCCAGG ATGTGCTGGG CATGACCGCC CGGCCGCCCA GGTTCACCAA GGACTTCCTG GCCGAGGCGG GCAGCATCCG CGGCGCCGTG GAGGCCTACG TGAGCGCGGT GCGGGAACGG CGCTTCCCCG GCCCCGAACA CGGCTTTTCG GCCTGA
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Protein sequence | MSVHSPQTRI TTRRLQEMRA SRTPIACLTA YDAGFAAVLD AAGVDVVLVG DSLGMVVQGL ETTVPVTLEH MIYHTSLAAR GTRRALLMAD MPFMSYASPE QALANAARLI QEGGAQMVKL EGDGAQEAVV ASLSRHGIPV CAHLGLRPQY IHKLGGYRVQ GRDSHAAERM IHDAVALQNA GADLLLLECV PALLAAEIRG MVDIPVIGIG AGVECDGQIL VLQDVLGMTA RPPRFTKDFL AEAGSIRGAV EAYVSAVRER RFPGPEHGFS A
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