Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0726 |
Symbol | |
ID | 7318073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 781692 |
End bp | 783218 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643615606 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_002512805 |
Protein GI | 220933906 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAC CTTCCGTCCA GCTGCGTCTC GGCCAGAGCC TCACCATGAC GCCCCAGCTG CAGCAGGCCA TCCGCCTGTT GCAGCTCTCC ACGCTGGAAC TCCAGACCCA GATCCAGGAA ACCCTGGAGA CCAATCCGAT GCTGGAGGCC CTGGAGGCCG GTGAGGCAGA GGGGGAGGGT GAATCCGCCG AGGCGGATGC CGTGGACCTG GGGACCGGCA ACGACTCGGT CACCAATCAG GCCGAGAACA ATCGCAACGA AACCACCAAC ACCCCGGAAG ATGCCGACGA CCGCGCCCGC GGCGAGGACA TCCCCGACGA ACTGCCCGTG GACAGCAACT GGGATGAGAT CTACGACGTA GCCCCGCCGG GCGCCACCGG CGGTATGCCG GAATACGACG GCCGGGACAT GTTCGAGAAC CAGAGTGGCG CCGGCGAGTC CCTCCATGAA CATCTCATGT GGCAGCTCAA TCTCACCCCC ATGAGCCCGG AGGACCGGGT CATCGCCATG ACCCTGGTGG ACGCCATCAA CGAGGACGGC TATCTCAGCG AATCCCTGGA GGCCATCCAG GCCAGCCTGT CCAACGACCT GGAGATCGAC CTGCCCCTGG AGGAGATCGA GGCGGTACTG CACCTGGTGC AGCAGCTCGA CCCGGTGGGC AGTGGCGCGC GGGATCTGTC CGAATGCCTG CTCATCCAGC TCCAGCAGAT GCCCGCCGAC ACCCCCTGGC TGGACAAGGC CCGGGAGCTG GTGCGCTCCC ACCTGGATTG CCTGGGCGCC CGGGACTACA AGCAGTTGCT GCGCAGCCTG CATGTCAGCG AGGCAGACCT GCAGGAGATC ATCGGCCTGA TCCAGGGGCT CAATCCACGC CCTGGCAGCC TGGTGAGCAA CATCAACCCC GAGTACATCG TCCCCGATGT GTTCGTGCGC AAGCATGAAG GTCGCTGGCA GGTGGAGCTG AACCCGGACA TCGCACCGCG GCTGCGGGTC AATCCGCTCT ACGCCAGTTT CGTGCGCCGC GCCGACACCA GCCAGGATAA TGTCTACATG CGCAACCAGC TGCAGGAGGC ACGCTGGTTC ATCAAGAGCC TGCAAAGCCG CAACGAGACC CTGCTGCGGG TGGCCATCGC CATCGTCGAA CAGCAGCGCG CCTTCCTGGA ACAGGGCGAA GAGGCCATGA AACCCCTGGT GCTGCGCGAT ATTGCCGAGC AACTGGACAT GCATGAGTCC ACCATCTCCC GGGTGACCAC GCAGAAATTC ATGCACACCC CCCGGGGCAT TTTCGAATTC AAATATTTCT TTTCAAGCCA CGTGGGCACC GCCGACGGTG GCGAGTGCTC CGCCACGGCG ATCCGCGCCA TGATCAAGAA GCTCATCGCC GAGGAGCCCC AGGGCAAGCC CATGAGTGAC AGCAAGATCG CCTCGATCCT GGTGGACCGG GGCATCCATG TGGCGCGGCG CACCGTGGCC AAGTACCGTG AGGCCATGTC CATACCACCT TCCAACGAGC GCAAGCGGCT CATCTGA
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Protein sequence | MLKPSVQLRL GQSLTMTPQL QQAIRLLQLS TLELQTQIQE TLETNPMLEA LEAGEAEGEG ESAEADAVDL GTGNDSVTNQ AENNRNETTN TPEDADDRAR GEDIPDELPV DSNWDEIYDV APPGATGGMP EYDGRDMFEN QSGAGESLHE HLMWQLNLTP MSPEDRVIAM TLVDAINEDG YLSESLEAIQ ASLSNDLEID LPLEEIEAVL HLVQQLDPVG SGARDLSECL LIQLQQMPAD TPWLDKAREL VRSHLDCLGA RDYKQLLRSL HVSEADLQEI IGLIQGLNPR PGSLVSNINP EYIVPDVFVR KHEGRWQVEL NPDIAPRLRV NPLYASFVRR ADTSQDNVYM RNQLQEARWF IKSLQSRNET LLRVAIAIVE QQRAFLEQGE EAMKPLVLRD IAEQLDMHES TISRVTTQKF MHTPRGIFEF KYFFSSHVGT ADGGECSATA IRAMIKKLIA EEPQGKPMSD SKIASILVDR GIHVARRTVA KYREAMSIPP SNERKRLI
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