| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0719 |
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| Symbol | |
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| ID | 7318066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 777059 |
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| End bp | 778171 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643615599 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002512798 |
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| Protein GI | 220933899 |
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| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG3159] Uncharacterized protein conserved in bacteria
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCTGG ATCTGCAAAA TGAAAATCGC GAGCTGCGCC GGCAGCTGCG TGAATTGCTG
AGCGAGGCGC GGGAGAACGA GCGCAAGCTG GACCGTTTCC AGGCCCTGGA ACTCAGATTG
GTGGCCGCCA CCGGTCTGGC GGAGATCATC AGTCTGTTGT CCAGTGCCCT GCCGCGCGCC
TCGCGTCTCG ATCACATGGG GCTCCTGCTC AGTGATATCA GCGGCGAGAT CGGCCTGGAA
CTGGCCGAGG CGGGCATCAT CCCGGTGCCC GGGCAGCTGG AACTCAACCC CCCCGTGCGT
CTGCCCACGG GGGTCTACCT GGGCCCCTAT GAGCCGCAAC GCCATGGCCG CTACTGTGCC
GGGCGCACGG ACCTTGGCAG TATCGCCATG CTGCCCCTGC GCCGCAGTGC CGACATGCAG
TCCGAGCCCC TGGGCACCCT GGTGTTCGGC AGCCGGGATC CGGGGCGCTA CGGCCTGGGG
GTAGACAGCT TCTTTCTGGA GCGCATGGCG GCCATCACGG CGGTGTGTAT CGAGAATGCC
CTGAACCTGC GCCGCTTGCG TGAACTGGGT CTGACCGACC CGCTCACGGG CCTGCGCAAC
CGGCGTTACT TCGACGAGCA GTTGCCCATG GAATGTCAGC GGGCCCGGCG TGAGCAGGGG
CCGTTGGCCT GCCTTTTTGT GGACATCGAT CGATTCAAGT CCATCAATGA TGTCCATGGC
CATCCCGCCG GTGACCAGGC CATCCGCGAG GTGGCCCAGC GCATTTCAGC CCATGTGCGT
CCCTTTGACC TGCTGGCGCG CTACGGCGGC GAAGAGTTCG TGATCCTGCT CTCCCGACTG
GATGCGGCGG CTACCCGGGA GGTGGCCGAG CGGGTGCGTC AGGCGGTGGC CCAGCGGCCG
GTAAGTCTGG CGGACGGACC GGAGCTGGAG CTGAGCGTGT CCCTGGGCGG TGCAGTGTGT
GCCCGCTGGG ATTCACGGGA TGAGCCCGAA CAGACCGGGC GGCGGCTCAT GGAGGCTGCG
GATCTGGCCT TGCTGGAGGC CAAGCAGTCG GGACGCAACC GGGTGGTCAT GGCCGCAGCA
CGCACCGGAC TGTTCGGACG TATCGGGGGA TAG
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| Protein sequence | MTLDLQNENR ELRRQLRELL SEARENERKL DRFQALELRL VAATGLAEII SLLSSALPRA
SRLDHMGLLL SDISGEIGLE LAEAGIIPVP GQLELNPPVR LPTGVYLGPY EPQRHGRYCA
GRTDLGSIAM LPLRRSADMQ SEPLGTLVFG SRDPGRYGLG VDSFFLERMA AITAVCIENA
LNLRRLRELG LTDPLTGLRN RRYFDEQLPM ECQRARREQG PLACLFVDID RFKSINDVHG
HPAGDQAIRE VAQRISAHVR PFDLLARYGG EEFVILLSRL DAAATREVAE RVRQAVAQRP
VSLADGPELE LSVSLGGAVC ARWDSRDEPE QTGRRLMEAA DLALLEAKQS GRNRVVMAAA
RTGLFGRIGG
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