Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0567 |
Symbol | |
ID | 7317915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 596302 |
End bp | 598470 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643615452 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_002512651 |
Protein GI | 220933752 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGGA CCGGGTTGGC CGTCTGGCCT GGCAGTCCCT ATCCCCTGGG TGCCACCTGG GACGGCGAGG GCGTGAACTT TGCACTGTTT TCCGAACACG CGGAACGGGT GGAGTTGTGC CTGTTCGATC CCCGGGGCAA GCGCGAGGTG CAGCGCATCG AACTGCGCTG GCAGACCGAC CAGGTGTTTC ATGCCTATCT GCCCGAGATC CGCCCGGGGC AGCTCTACGG TTACCGCGTC TACGGCCCCT ACGATCCGTC CCAGGGCCAT CGCTTCAACC ATCACAAGCT GTTGCTGGAT CCCTACGCGA AGCAGTTGGT GGGCCAGGTA CGCTGGAGCG ATGCCCTGTT CGGTTATCGC ATCGGCGCGC CCCGGGAAGA CCTGCAGATG GACCGCCGCG ATTCCGCGCC GGGCATGCCC CGTTGCCAGG TGATCGACAC CGCCTTCACC TGGGGCGACG ATCGCCATCC GAAGGTGCCC TGGCACGATA CCGTGATCTA TGAACTGCAT GTCAAAGGGT TCACCGCGCT CAACGAGCTG GTGCCGCCGA CCCTGCGCGG CACCTATGCG GGTCTTGCCA CCGCGCCGGT GATCAGCTAT CTCAAGCGTC TGGGCGTGAC CGCGGTGGAG CTGATGCCCG TGCATGCCTT CGTCGATGAT CGCAACCTGG TGGCCCAGGG ACTGCGCAAC TACTGGGGCT ATAACTCCAT CGGCTACTTC GCGCCGGACC TGCGCTACAG CGCCTCGGGT GAGGTCGACG AATTCAAGAC CATGGTCAAG ACCCTGCACA GCGCCGGCAT CGAGGTGATC CTGGACGTGG TCTACAACCA CACCGCCGAG GGCAATCAGC TGGGGCCGAC CTTCTGTTTC CGGGGTATCG ACAACAGTGC CTACTATCGC CTGGTCAATG AGGACCGGCG TTTCTACATG GACTACACCG GTTGCGGCAA TACGCTCAAC ATGCGCCATC CGCGGGTGTT GCAGCTGATC ATGGATTCCC TGCGCTACTG GGTGCAGGAG ATGCACGTGG ACGGGTTCCG CTTCGATCTC GCCTCGGCGC TCGCCCGTGA ACTGCACGCG GTGGACCGCC TGGGCGCCTT CTTCGACATC ATTCACCAGG ACCCGGTGCT CTCCCAGGTG AAGCTCATCG CCGAACCCTG GGACCTGGGC GAGGGCGGTT ACCAGGTGGG CAATTTCCCG GTGGGCTGGA CCGAGTGGAA CGGTCGCTAC CGGGATTCCG CGCGCGCCTA CTGGAAGGGC GACGAGGCCA TGATGGCGGA CATGGCCTAC CGGTTGACCG GGTCCTCAGA TCTCTACGAA TCCAGCGGAC GCCGTCCCTA CGCCAGTATC AATTTCATCA CCTGTCACGA CGGCTTCACC CTCGAGGACC TGGTCAGCTA CAACCACAAG CACAACGAGG CCAACGGCGA GGGCAACCGC GACGGCGAGG CTCACAACCT GTCCTGGAAC TGCGGCGAGG AAGGCCCCAC GACCAACGGC CACATCCGCG CCCTGCGCGC GCGTCAGAAG CGCAACCTGC TGGCCACCCT GTTCCTGTCC CAGGGGATTC CCATGCTCAC GGCGGGCGAC GAACGCGGGC GCACCCAGCA GGGCAACAAC AACGCCTATT GCCAGGACAA CCCGCTGAGC TGGCTGGACT GGGAACTGGA CAGCGATCGC AGGACGCAGC TCGGCTTCGT GCGCCGGCTC ATCCGCCTGC GCCGCGAGCA CCCGGCCCTG CGCCGTCGCC AGTTCTTCCG GGGGCACCAC GTCAATGGCG GGCACGTGAA GGATCTCACC TGGCTGCGTC CCGATGGCGA GGAAATGACC GACGTGGACT GGCATCAGCC CTTCGGCCGG GTGCTGGGCA TGTTCGTGGC CGGTGATGCC TTCGAGGAAT ACGACGAGTA CGGGCGCAGG ATCCAGGATT CGGACCTGAT CCTGCTGTTC AACGCCCATC ACGCGCCCAT CGACTTCCGT CTCCCGGCCG AGCCAGCCCG TACCCGCTGG GCGGTGCTGG TGGACACCCA TTTCGAGGAC GGGGAACGCG CGGACAGGCG CAATTTTCAC AGTCACGAGT ACTATCCCCT GCAGGGGCGT TCGGTGGTGC TGCTGATCAA CACCAGCCGA CCGGTCAGGC CGGCGCAGGA CTGCGACGGT CTGATCTAG
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Protein sequence | MSRTGLAVWP GSPYPLGATW DGEGVNFALF SEHAERVELC LFDPRGKREV QRIELRWQTD QVFHAYLPEI RPGQLYGYRV YGPYDPSQGH RFNHHKLLLD PYAKQLVGQV RWSDALFGYR IGAPREDLQM DRRDSAPGMP RCQVIDTAFT WGDDRHPKVP WHDTVIYELH VKGFTALNEL VPPTLRGTYA GLATAPVISY LKRLGVTAVE LMPVHAFVDD RNLVAQGLRN YWGYNSIGYF APDLRYSASG EVDEFKTMVK TLHSAGIEVI LDVVYNHTAE GNQLGPTFCF RGIDNSAYYR LVNEDRRFYM DYTGCGNTLN MRHPRVLQLI MDSLRYWVQE MHVDGFRFDL ASALARELHA VDRLGAFFDI IHQDPVLSQV KLIAEPWDLG EGGYQVGNFP VGWTEWNGRY RDSARAYWKG DEAMMADMAY RLTGSSDLYE SSGRRPYASI NFITCHDGFT LEDLVSYNHK HNEANGEGNR DGEAHNLSWN CGEEGPTTNG HIRALRARQK RNLLATLFLS QGIPMLTAGD ERGRTQQGNN NAYCQDNPLS WLDWELDSDR RTQLGFVRRL IRLRREHPAL RRRQFFRGHH VNGGHVKDLT WLRPDGEEMT DVDWHQPFGR VLGMFVAGDA FEEYDEYGRR IQDSDLILLF NAHHAPIDFR LPAEPARTRW AVLVDTHFED GERADRRNFH SHEYYPLQGR SVVLLINTSR PVRPAQDCDG LI
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