| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0562 |
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| Symbol | |
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| ID | 7317910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 592428 |
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| End bp | 592991 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643615447 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002512646 |
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| Protein GI | 220933747 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGTCA TCAACTGGCT GCTGCAAAGG CGACTGAAGA ACCGCATCGC GGATCTCAGG
CCGCAATTAT ATCGGACCGC CTATGCCTGG TGTCATGACC CGGCGCGGGC CGATGACCTG
GTGCACGAGG CGCTGGTCAA GGCCATCTCC CGTCTGCGCA GCCTGCAGGA CGAGGACGCG
CTCAAACCCT GGCTGTTCCG CATCATGACC AATTGCCACC GGGACTGGCT GCGCCGGCAG
AAGGACACGG TGGACGTGTA CGAGGCGGAG CTGCCCTGCG AGGACTGCCC GGAGATGAAC
GCCGAACGTG CCGCCACGGT GAAGAGCGTG CGCGAGGCGG TGCGCGGCCT GAGCGACGAC
CAGCGCAAGG TGCTCACCCT GGTGGACCTG GAAGGCTTCT CCTATGGCGA GGTGGCCGGG
ATCCTCGAAC TGCCCATCGG CACGGTCATG AGCCGCCTGA GCCGGGCCCG CCAGCAGCTC
AAGCGCGAGC TGCTGCGCAA CGAACGCAAG GCCGGCGCCG CAACCAGTCT CAAGCTCGTA
AGGAACCAGC ATGAAAACGG ATAA
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| Protein sequence | MAVINWLLQR RLKNRIADLR PQLYRTAYAW CHDPARADDL VHEALVKAIS RLRSLQDEDA
LKPWLFRIMT NCHRDWLRRQ KDTVDVYEAE LPCEDCPEMN AERAATVKSV REAVRGLSDD
QRKVLTLVDL EGFSYGEVAG ILELPIGTVM SRLSRARQQL KRELLRNERK AGAATSLKLV
RNQHENG
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