Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0552 |
Symbol | |
ID | 7317900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 583273 |
End bp | 584328 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643615437 |
Product | ApbE family lipoprotein |
Protein accession | YP_002512636 |
Protein GI | 220933737 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAGGC GCAACGGCCA CGCCAGGGAC ACCAAGGGCG CAATGGGACA CCGGGGGATC TCACATCGAC AGGCCTTCGC GGCCGGCCTT GCCGGGTCGC TTGCCTGTAT TGCCCTGCTG GTCGCCCCCA TCGCCCTCGC CGACTGGCAC CGACAGGACG CCCAGATCAT GGGCACCACG GTACTGGTGC AGGCCTGGCA CAAGGATGCC GCCGTGGCCC GCGCCGGGAT CGACGCGGTC ATCCGGGACA TGCATCGCAT CGATGCCCTG ATGAGCACCT ACAAGGCTGA CAGCGAACTC TCCCGCCTCA ATGCCCAGGC CGCGCATCAC CCCGTACGCG CCAGCGAGGA GCTGTTCTCG CTCATCTCCC GCGCCCTGGA GTTCTCGGAA CTGAGCGGCG GCGCCTTCGA CGTCACCTAC GCCAGCGTCG GCTATCGCTA CGACTACCGC CAGGGCATCC GCCCCGACGA CCGGACCCGG GAAGCACTCC TGCCCGGCAT CGACTTCCGC CACGTGATCC TCGACCGGGA GCAGGGCACC ATCGCCTACC GGCGCGAGGG TGTGCGCATC GACCTGGGCG GCATCGCAAA GGGTTATGCG GTGGAACGCG GCGCCGCCAT CCTGCGCAAA CATGGCATCG AGCACGGACA GGTCGGCGCA GGCGGTGACA CCCGTCTGCT GGGCGACCGG CGCGGCCGCC CCTGGGTCGT CGGCATACGC GACCCGCGCG ACCGTGACCG CATGGTGGCG CAACTGCCCC TGGTGGACGA AGCCATCTCC ACCTCCGGCG ACTACGAGCG CTATTTCGAG GAAGACGGTC ACCGCTACCA CCACATCATC GACCCGGGCA CCGGCACCTC AGCCCGCGGG GTACGCAGCG TGAGTGTCAT CGGCCCTGAC GCCACCCTCA CGGACGCCCT GTCCACCGGG GTGTTCGTGC TGGGCGCGAC GGACGGGCTC GAACTGATCA ACCGGCTCCC GGACGTGGAG GCCGTGATCG TCGACGACGA GGGTCGGTTG TGGTTTTCAT CCGGGCTGGA CATGCAACAG CCCTGA
|
Protein sequence | MARRNGHARD TKGAMGHRGI SHRQAFAAGL AGSLACIALL VAPIALADWH RQDAQIMGTT VLVQAWHKDA AVARAGIDAV IRDMHRIDAL MSTYKADSEL SRLNAQAAHH PVRASEELFS LISRALEFSE LSGGAFDVTY ASVGYRYDYR QGIRPDDRTR EALLPGIDFR HVILDREQGT IAYRREGVRI DLGGIAKGYA VERGAAILRK HGIEHGQVGA GGDTRLLGDR RGRPWVVGIR DPRDRDRMVA QLPLVDEAIS TSGDYERYFE EDGHRYHHII DPGTGTSARG VRSVSVIGPD ATLTDALSTG VFVLGATDGL ELINRLPDVE AVIVDDEGRL WFSSGLDMQQ P
|
| |