| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0439 |
|---|
| Symbol | groEL |
|---|
| ID | 7317269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 462037 |
|---|
| End bp | 463677 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643615323 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_002512524 |
|---|
| Protein GI | 220933625 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000414877 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA AAGAAGTCCG CTTCAGTGAT GACGCCCGTT CCCGCATGGT CCGTGGCGTG
AACGTCCTGG CCAATGCCGT GAAGGTCACC CTGGGTCCCA AGGGCCGCAA TGTGGTGCTG
GAGAAGTCCT TCGGCGCCCC CACCGTGACC AAGGACGGCG TGTCCGTGGC CAAGGAGATC
GAACTGGAAG ACAAGTTCGA GAACATGGGT GCCCAGATGG TGAAGGAAGT CTCCTCCCAG
ACCTCCGACA TCGCCGGTGA CGGCACCACC ACCGCCACCG TGCTGGCCCA GGCCATCGTG
CGCGAGGGCA TGAAGTCCGT GACCGCCGGC ATGAACCCCA TGGACCTCAA GCGCGGCATC
GACAAGGCCG TGATCGCCGC CGTGGAAGAG CTGAAGAAGC TGTCCAAGCC CTGCACCGAC
AGCAAGGCCA TTGCCCAGGT GGGCACCATC TCCGCCAACT CCGACGAGTC CATCGGCCAG
ATCATCGCCG ATGCCATGGC GAAGGTGGGC AAGGAAGGCG TGATCACCGT GGAGGAAGGT
TCCTCCCTGG AGAACGAGCT GGACGTGGTG GAAGGCATGC AGTTCGACCG CGGCTACCTG
TCCCCCTACT TCGTCAACAA CCAGCAGAAC ATGAGCGCCG AGCTGGATGA CTGCTTCGTG
CTGCTCTACG ACAAGAAGAT CTCCAACATC CGCGACCTGC TGCCCGTGCT GGAAGGCGTC
GCCAAGGCCG GCAAGCCCCT GCTGATCATC GCCGAGGACA TCGAGGGCGA GGCCCTGGCC
ACCCTGGTGG TGAACACCAT CCGCGGCATC GTGAAGGTGG CCGCCGTGAA GGCCCCGGGC
TTCGGTGACC GTCGCAAGGC CATGCTGCAG GATATCGCCA TCCTGACCGG CGGCCAGGTG
ATCTCCGAAG AGGTCGGCCT GTCCCTGGAG AAGGCCAGCC TCGACGACCT GGGCCAGGCC
AAGCGCATCG TGGTGACCAA GGAAAACAGC ACCATCATCG ACGGCGCCGG CAAGCCCGAC
GAGATCAAGG GTCGTGTGGA GCAGATCCGT GCCCAGATCG AGGACGCCAC CTCTGATTAC
GACAAGGAGA AGCTCCAGGA GCGCGTGGCC AAGCTGGCCG GCGGCGTGGC CGTGATCAAG
GTCGGTGCCG CCACTGAGGT GGAAATGAAG GAGAAGAAGG CCCGCGTGGA AGACGCCCTG
CACGCCACCC GCGCTGCGGT GGAAGAAGGC GTGGTGCCCG GCGGCGGTGT CGCCCTGGTG
CGTGCCCTGC AGGCCCTCAA GAGCCTCAAG GGTGCCAACC ACGACCAGGA CATCGGCATC
GCCATCGCCC GTCGCGCAAT GGAAGAGCCC CTGCGTCAGA TCGTGTCCAA CTGCGGCGAA
GAGCCCTCCG TGGTGCTGAA CAACGTGGTG GAAGGCAAGG GTAACTACGG TTACAACGCC
GCCACCGGCG AGTACGGCGA CATGATCGAA ATGGGTATCC TGGATCCCAC CAAGGTCACC
CGCAGCGCCC TGCAGAACGC CGCTTCCGTG TCCGGTTTGA TCATCACCAC CGAGGCGATG
GTCGCCGAGC TGCCGAAGAA GGGCGACTCC GCCCCCGCCG GCGGCGGCAT GGGCGACATG
GGCGGCATGG GCATGATGTA A
|
|---|
| Protein sequence | MSAKEVRFSD DARSRMVRGV NVLANAVKVT LGPKGRNVVL EKSFGAPTVT KDGVSVAKEI
ELEDKFENMG AQMVKEVSSQ TSDIAGDGTT TATVLAQAIV REGMKSVTAG MNPMDLKRGI
DKAVIAAVEE LKKLSKPCTD SKAIAQVGTI SANSDESIGQ IIADAMAKVG KEGVITVEEG
SSLENELDVV EGMQFDRGYL SPYFVNNQQN MSAELDDCFV LLYDKKISNI RDLLPVLEGV
AKAGKPLLII AEDIEGEALA TLVVNTIRGI VKVAAVKAPG FGDRRKAMLQ DIAILTGGQV
ISEEVGLSLE KASLDDLGQA KRIVVTKENS TIIDGAGKPD EIKGRVEQIR AQIEDATSDY
DKEKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RALQALKSLK GANHDQDIGI AIARRAMEEP LRQIVSNCGE EPSVVLNNVV EGKGNYGYNA
ATGEYGDMIE MGILDPTKVT RSALQNAASV SGLIITTEAM VAELPKKGDS APAGGGMGDM
GGMGMM
|
|---|
| |