Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0358 |
Symbol | rho |
ID | 7316497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 400846 |
End bp | 402105 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643615242 |
Product | transcription termination factor Rho |
Protein accession | YP_002512443 |
Protein GI | 220933544 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.956758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTGA CCGAACTCAA GCGCAAGCCC GCAGCAGAAC TCGTTGAACT CGCCCAGTCC ATGAAGATCG AAGGCATGGC GCGGGCCCGC AAGCAGGACA TCATCTTCGC CATGCTCAAG GCGCATGCGA AGAACGGAGA GGACATCTTC GGCGATGGTG TGCTGGAAAT ACTTCAGGAT GGTTTCGGCT TCCTGCGCTC GGGGGACAGC TCCTACCTGG CAGGCCCCGA CGACATCTAC GTCTCGCCCT CCCAGATCCG CCGCTTCAGC CTGCGCACCG GTGACACCAT CTCCGGCAAG ATCCGGCCCC CAAAGGAAGG CGAGCGCTAT TTCGCGCTGC TCAAGGTGGA CCAGATCAAT TTCGAGGCGC CGGAAAACGC CAAGAACAAG GTCTTGTTCG AGAACCTCAC CCCCCTGCAT GCCAGCGAGC GCATGCGCAT GGAGCGGGGC AACGGCAGCA CCGAGGACAT CACTGCGCGG GTCATCGACA TCGTCGCCCC CTTCGGCAAG GGCCAGCGCG GCCTGATCGT CTCCCCGCCC AAGGCGGGCA AGACCCTGAT GCTGCAGAAC ATCGCCCAGA GCATCGCCAC CAACTACCCG GACTGCTACC TGATCGTGCT GCTCATCGAC GAGCGGCCCG AGGAAGTGAC CGAGATGGCG CGCATGGTGC AGGGCGAGGT GATCTCCTCC ACCTTCGACG AGCCCGCCAG CCGGCACGTG CAGGTGGCCG AGATGGTCAT CGAGAAGGCC AAGCGCCTGG TGGAGCACAA GCGTGACGTG GTGATCCTGC TGGACTCCAT CACCCGCCTG GCGCGGGCCT ACAACACCGT GGTGCCGTCC TCCGGCAAGG TGCTCACCGG CGGCGTGGAC GCCAACGCCC TGCACCGGCC CAAGCGCTTC TTCGGCGCGG CGCGCAACAT CGAGGAGGGC GGCAGCCTGA CCATCCTCGC CACCGCCTTG GTGGACACCG GCTCCAAGAT GGACGAGGTG ATCTACGAGG AGTTCAAGGG CACCGGCAAC ATGGAGATCC ACCTGGATCG CCGCATCGCC GAAAAGCGCA CCTACCCCGC CATCAACATC AACCGCTCCG GCACCCGCCG CGAAGAACTC CTCACCGACC CCGACGAGCT GCAGAAGCTC TGGATCCTGC GCAAGTTCCT GCACTCCATG GACGAGCTGG AGGCCATCGA GTTCCTGCTC AGCCGCCTGC AGTCCACCAA GGTGAACAGC GAGTTCTTCG ATATGATGAA GAAGGGATGA
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Protein sequence | MNLTELKRKP AAELVELAQS MKIEGMARAR KQDIIFAMLK AHAKNGEDIF GDGVLEILQD GFGFLRSGDS SYLAGPDDIY VSPSQIRRFS LRTGDTISGK IRPPKEGERY FALLKVDQIN FEAPENAKNK VLFENLTPLH ASERMRMERG NGSTEDITAR VIDIVAPFGK GQRGLIVSPP KAGKTLMLQN IAQSIATNYP DCYLIVLLID ERPEEVTEMA RMVQGEVISS TFDEPASRHV QVAEMVIEKA KRLVEHKRDV VILLDSITRL ARAYNTVVPS SGKVLTGGVD ANALHRPKRF FGAARNIEEG GSLTILATAL VDTGSKMDEV IYEEFKGTGN MEIHLDRRIA EKRTYPAINI NRSGTRREEL LTDPDELQKL WILRKFLHSM DELEAIEFLL SRLQSTKVNS EFFDMMKKG
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