Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0290 |
Symbol | |
ID | 7316266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 327740 |
End bp | 330445 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643615175 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_002512376 |
Protein GI | 220933477 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATGATC CCTCGCGTCA GGACACCCCC TGGCATCAGC TGGAGACCTC GGAAACCCTG CAGCGTCTGG AGGTCTCCGA GGGCGGGCTT GCGGGCGAGC AGGTGCGCGA GCGCCTGGAA CGCTTCGGCT ACAACCGCCT GCCGCCGCCG GAGCGTACCG GGCCGCTCAA GCGCTTCCTG CTGCAGTTCC ACAACGTGCT GATCTACGTG CTCATCGCCG CCGCCCTGGG CACCGCCTTC CTGCAGCACT GGGTGGATAC CGGCGTCATC CTCGGCGTGG TGCTGATCAA CGCCATCATC GGCTTCATCC AGGAGGGTAA AGCGGAAGAG GCGCTGGACG CCATCCGCAA CATGCTCTCG CCCAAGGCCC TGGTGCTGCG CGATGGCCAG CGCCGCACCT TGCCCGCCGA GGAACTGGTG CCCGGTGACA TAGTGTTCCT GCAGGCGGGC GACAAGGTGC CCGCGGATCT GCGCCTGCTG CGCGCCCACA ACATGCGCAT CGACGAGGCG GTGCTCACCG GTGAATCGGT GGCGGTGGAC AAGCAGACCG GTCCCGTGGA CGCACAGGCG GACCTGGGCG ACCAGGCCAG CATGGCCTTC TCCGGAACAC TGGTGGCCTT CGGCCAGGGC AAGGGCGTGG TGGTGGGCAC GGGCGCGAGT ACCCAGATCG GCCGCATCTC CACCCTGCTC GGCGAGGTGG AGACGCTGAC CACGCCGCTG CTGCGCGACA TCGCCGTGTT CGGCCGTTGG CTTTCGGTCG CCATCGTGGC ATTGGCGGGC TTCACCTTCG CCTTCGGTTA CTGGTTCCGG GACTACGACA TCCTGGAGAC CTTCCTGGCC GCCGTGAGCC TGGCGGTGGC GGCCATCCCC GAGGGCCTGC CCGCCATCAT GACCATCACG CTCGCCATCG GCGTGCAGCG CATGGCGGCA CGCAACGCCA TCATCCGTCG TCTGCCGGCC GTGGAGACCC TGGGCTCCGT GACCACCATC TGCTCCGACA AGACCGGCAC GCTCACCCGC AACGAGATGA CCGTCAAATC CATCGTCACC GCCGAGGAGA TCTTCGAGGT GGGCGGGGTC GGCTACGAGC CCCATGGCGG CTTCTCACTC GACGGTCAGG ACATCGACCC CCAAGACCAT GTCGTCCTCG CCGAGGGCCT GCGCGGCATC CTGCTGTGCA ACGACGCGGA ACTGCACCAG CGCGACGGCC AGTGGGTCCT GGAGGGGGAC CCCACCGAGG GCTCGCTGGT CACCGCCGCG CTCAAGGCGG GACTCGACCA CAGGGAGACC AACGAACTCT ACCCCCGGGA TGACGTGATT CCCTTCGAGT CCTCCTACAA GTTCATGGCC ACCCTGCATC ACCATCACGA GGGCAGGCAG AGCTTCATCT TCCTCAAGGG TGCGCCGGAG CGGGTACTGG CGGTGTGCGC GAAGGAGCGC ACCGCGGACG GCGACCGGGA GATCGACGCC GATCGCTGGC AACGGCAGAT GGACGAGATC GCAGCAAAGG GCCAGCGCCT GCTGGCGCTC GCGGTCAAGA CCGTGGACGC GGACAAGCGC AGCCTGGCGT TCCCCGACAT CGAGGACGGG GGACTTACCA TGCTGGCCCT GTGCGGCATC ATCGACCCGC CCCGGGACGA GGCCATTGAA GCGGTGAAGG AATGCCAGGA GGCGGGCATC CGGGTGAAGA TGATTACCGG TGACCATGCC GTCACCGCCG AGGCCATTGC CCGGGAACTG GGCATCCACA CCGAGGGCGG GGTGATGACC GGTCACGAGC TAGAAAAGAT CAGCGACGAG GAGATGCAGC AGGTGGTGCA GAAGGTGGAC GTGTTCGCCC GCGCCACCCC CGAGCACAAG CTGCGCCTGG TGCGTGCCAT CCAAACCCAT GGCCACGTGG TGGCCATGAC CGGCGACGGG GTGAACGACG CCCCGGCGCT GAAACGCGCC GACGTGGGCG TGGCCATGGG CATCAAGGGT ACCGAGGCCG CCAAGGAGGC CGCCGAGATG GTGCTGGCCG ACGACAACTT CGCCTCCATC GCCCATGCCG TGGAGGAAGG CCGCACCGTC TACGACAACC TGCGCAAGGC CATCCTGTTC CTGCTGCCCA CCAACGGCGG CCAGGCCTTC ACCATCGTCG CCGCCATCCT GCTGGGCCTG ACCCTGCCGC TCACGCCGGT GCAGGTGTTG TGGGTGAACA TGGTCACCGC CGTGACCCTG GCCCTGGCGC TCGCCTTCGA GCCCACCGAG CCCGGCGTCA TGAAACGAGC ACCCCGTCCG CCCAACACCC CGATCCTGTC CGGCTTTCTC ATCTGGCGGG TGGTGTTCGT CTCGGCCCTG CTGGTGGCCG GCACCTTCGG CCACTTCCTG TGGATGCAAC AACACGGCAT GGCCGTGGAA CTGGCGCGCA CCGCCGCCAT CAACACCCTG GTCATGGGCC AGCTCTTCTA TCTCTTCAAC AGCCGCTACA TCCTGGAGCC GGTGTTCAAC CGGGAGGGCC TCCTGGGCAG CCGCGCGGTG CTCATCGCCA TCGGCGTGCT GATCGTGCTG CAGGGCCTGT TCACCTACGC GCCGCCGCTT CAGTTCCTGT TCGGCACCAC CGCCCTGGGA CTCGAGGACT GGGGCCGCAT CCTGGCCTTC GGTGTCATCC TGTTCGTGCT CGTGGAACTG GAGAAGGCCT TCCTCAAGTG GCGCCAGGTG GGTTGA
|
Protein sequence | MNDPSRQDTP WHQLETSETL QRLEVSEGGL AGEQVRERLE RFGYNRLPPP ERTGPLKRFL LQFHNVLIYV LIAAALGTAF LQHWVDTGVI LGVVLINAII GFIQEGKAEE ALDAIRNMLS PKALVLRDGQ RRTLPAEELV PGDIVFLQAG DKVPADLRLL RAHNMRIDEA VLTGESVAVD KQTGPVDAQA DLGDQASMAF SGTLVAFGQG KGVVVGTGAS TQIGRISTLL GEVETLTTPL LRDIAVFGRW LSVAIVALAG FTFAFGYWFR DYDILETFLA AVSLAVAAIP EGLPAIMTIT LAIGVQRMAA RNAIIRRLPA VETLGSVTTI CSDKTGTLTR NEMTVKSIVT AEEIFEVGGV GYEPHGGFSL DGQDIDPQDH VVLAEGLRGI LLCNDAELHQ RDGQWVLEGD PTEGSLVTAA LKAGLDHRET NELYPRDDVI PFESSYKFMA TLHHHHEGRQ SFIFLKGAPE RVLAVCAKER TADGDREIDA DRWQRQMDEI AAKGQRLLAL AVKTVDADKR SLAFPDIEDG GLTMLALCGI IDPPRDEAIE AVKECQEAGI RVKMITGDHA VTAEAIAREL GIHTEGGVMT GHELEKISDE EMQQVVQKVD VFARATPEHK LRLVRAIQTH GHVVAMTGDG VNDAPALKRA DVGVAMGIKG TEAAKEAAEM VLADDNFASI AHAVEEGRTV YDNLRKAILF LLPTNGGQAF TIVAAILLGL TLPLTPVQVL WVNMVTAVTL ALALAFEPTE PGVMKRAPRP PNTPILSGFL IWRVVFVSAL LVAGTFGHFL WMQQHGMAVE LARTAAINTL VMGQLFYLFN SRYILEPVFN REGLLGSRAV LIAIGVLIVL QGLFTYAPPL QFLFGTTALG LEDWGRILAF GVILFVLVEL EKAFLKWRQV G
|
| |