Gene Tgr7_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0234 
Symbol 
ID7316812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp251828 
End bp252409 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content70% 
IMG OID643615119 
Productgeneral secretion pathway protein J 
Protein accessionYP_002512320 
Protein GI220933421 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR01711] general secretion pathway protein J 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTGT TTGCGGTGGT GGCAATGATG GCCTACGGGG GGCTGAGCGC GGTGCTGGAT 
TCCCGTCAGC ACACGGACCG GGCCTCGCGC AGCCTGAACG AACTGCAGAT GGCCTTCACC
CTGCTGGGGC GGGACTTCGA GCAGGTGGTG GCCCGGCCGG TGCGCGATCA ATACGGCGAC
CCGATGGCGC CCCTGCGCTT CAGCCCCTTC AGCGATCAGC CGCGCCTGGA ACTGGTGCGC
GCGGGCGGTG CCTTCGGCGC CCAGCGGGTG GCCTGGGAGA TCCGCGAGGA TCGCCTCTAC
CGGCTCACCT GGACGGTGCT CGACGGTGCC GATCCCGCCG AGCCTCAAGG CGTCATGCCC
CTGTTGGGGG AACCGAGCGC CGAAGGGGAT GAGCCGGTGC AGGGCGTGCG TGCCTGGACC
CTGCGCTTTC ACTACCTGGA CGAGACCGGC CAGTTCGCCG TGGCCGAGAC CTGGCCCCTG
GAGATCAATC CCCTGGCACC CGAGGCCCTG CCCCGGGCGG TGGAGCTGAC CCTGGAACGC
CAGGACGGCC AGCAGCTGAC CCGCTGGTTC GCGCTGCCAT GA
 
Protein sequence
MAVFAVVAMM AYGGLSAVLD SRQHTDRASR SLNELQMAFT LLGRDFEQVV ARPVRDQYGD 
PMAPLRFSPF SDQPRLELVR AGGAFGAQRV AWEIREDRLY RLTWTVLDGA DPAEPQGVMP
LLGEPSAEGD EPVQGVRAWT LRFHYLDETG QFAVAETWPL EINPLAPEAL PRAVELTLER
QDGQQLTRWF ALP