Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0234 |
Symbol | |
ID | 7316812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 251828 |
End bp | 252409 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615119 |
Product | general secretion pathway protein J |
Protein accession | YP_002512320 |
Protein GI | 220933421 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR01711] general secretion pathway protein J |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTGT TTGCGGTGGT GGCAATGATG GCCTACGGGG GGCTGAGCGC GGTGCTGGAT TCCCGTCAGC ACACGGACCG GGCCTCGCGC AGCCTGAACG AACTGCAGAT GGCCTTCACC CTGCTGGGGC GGGACTTCGA GCAGGTGGTG GCCCGGCCGG TGCGCGATCA ATACGGCGAC CCGATGGCGC CCCTGCGCTT CAGCCCCTTC AGCGATCAGC CGCGCCTGGA ACTGGTGCGC GCGGGCGGTG CCTTCGGCGC CCAGCGGGTG GCCTGGGAGA TCCGCGAGGA TCGCCTCTAC CGGCTCACCT GGACGGTGCT CGACGGTGCC GATCCCGCCG AGCCTCAAGG CGTCATGCCC CTGTTGGGGG AACCGAGCGC CGAAGGGGAT GAGCCGGTGC AGGGCGTGCG TGCCTGGACC CTGCGCTTTC ACTACCTGGA CGAGACCGGC CAGTTCGCCG TGGCCGAGAC CTGGCCCCTG GAGATCAATC CCCTGGCACC CGAGGCCCTG CCCCGGGCGG TGGAGCTGAC CCTGGAACGC CAGGACGGCC AGCAGCTGAC CCGCTGGTTC GCGCTGCCAT GA
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Protein sequence | MAVFAVVAMM AYGGLSAVLD SRQHTDRASR SLNELQMAFT LLGRDFEQVV ARPVRDQYGD PMAPLRFSPF SDQPRLELVR AGGAFGAQRV AWEIREDRLY RLTWTVLDGA DPAEPQGVMP LLGEPSAEGD EPVQGVRAWT LRFHYLDETG QFAVAETWPL EINPLAPEAL PRAVELTLER QDGQQLTRWF ALP
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