| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0226 |
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| Symbol | |
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| ID | 7316804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 244747 |
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| End bp | 246303 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643615111 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_002512312 |
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| Protein GI | 220933413 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTC CATCCCCGAC CCTGGAGAAT GCCGGCCTGA CCGGTGAGCT GCGCGAGGAA
CTGGCGGCCC AGGCTGCGGG CCCGGAGCAG GGCCTGAGCT TCGGTTTCGC CCGCCGCCAC
GGCGTGGTCC TGCTGCAGGA GAAGATTTCA TCCGGGCAGC CGGTGAACGT CGCCTGCCGA
CAGGGCGTCA GCAGTCAGAC CCTGGCGGAG CTGCGCCGCC ACCTGGGTTG TCCCCTGCGT
ATCGAGGCGG TCAGCGATGC GCGCTTCGAC GCCCTGCTTC GGGAGCGTTA CGAGCGCAGC
TCCAGCGACG CCATGCAGCT CATGGGCGAC ATGGGCGAGG ACGACCTGGA CAGCGTGGCG
CGCAGCCTGT CGGAGCCCGA GGACCTGCTG GAAACCGAGG ACGATGCGCC CATCATCCGG
CTCATCAACG CCCTGCTCAC CGAGGCGGTG AAAGAGAACG CCTCGGACAT CCACATCGAA
CCCTTCGAGA ACCGCCTCAC GGTGCGTTTC CGCGTGGACG GCGTGCTGCG CCAGGTGCTG
GAACCGCCCC GGGTGCTGGC GCCGCTGATC ACCTCCCGCA TCAAGGTCAT GGCGCGCCTG
GACATCGCCG AGAAGCGTCT GCCCCAGGAC GGACGCATCT CGCTCAAGGT GGCCGGTCGT
GCCGTGGACG TGCGCGTCTC CACCCTGCCC TCCGGTCACG GCGAGCGGGT GGTGCTGCGT
CTGCTGGACA AGCAGGCCGG GCGCCTGGAC CTGGTGCAGC TGGGCATGGA CGACAGAACC
CTCAAGGTGA TGCAGCGCGC CATCCACCGG CCCCACGGCA TCATCCTGGT TACCGGCCCC
ACCGGCTCCG GCAAGACCAC CACCCTGTAC GCGGCGCTCA CCCAGCTCAA CGACCGCAGC
CGCAACATCC TCACCGTCGA AGACCCCATC GAGTACGATC TCGACGGCAT CGGCCAGACC
CAGATCAACC CCAAGGTGGA GATGACCTTC GCCCGTGGCC TGCGCGCCAT CCTGCGCCAG
GACCCGGACG TGGTGATGGT GGGCGAGATC CGCGACCTGG AAACGGTGCA GATCGCCGTG
CAGGCCTCGC TCACCGGTCA CCTGGTGCTC TCCACCCTGC ACACCAACAC CGCCGTGGGC
GCCATCACCC GCCTGCGGGA CATGGGCGTG GAACCCTTCC TGCTGTCCTC GACCGTTGTG
GCCATCCTGG CCCAGCGACT GGTGCGCGTG CTGTGCGATC AGTGCAAGGA GCCCTATGCG
GCCGGCGAGA CCGAGTGCGA GCTGATCGGT CTGGCCAAGG AGCCGCCGCC CACGCTCTAT
CGCGCCGTGG GCTGTGACCA CTGCAACGGG CTTGGCTACC GGGGCCGAAC CGGCATCTAC
GAACTGGTGG AAGTGGACGA TGCCCTGCGC AACCTGATCC ACGATGGCGC CGGCGAGCAG
CAGCTGGAAC GCCACGCCCG CGCCCACGGC CCCAGCATCC GCGCCGACGG CCGGCGCCGC
GTCCTCGCCG GCCAGACCAC GGTGGAGGAA GTGCTGCGTG TGACGAAAGA AGACTAG
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| Protein sequence | MSSPSPTLEN AGLTGELREE LAAQAAGPEQ GLSFGFARRH GVVLLQEKIS SGQPVNVACR
QGVSSQTLAE LRRHLGCPLR IEAVSDARFD ALLRERYERS SSDAMQLMGD MGEDDLDSVA
RSLSEPEDLL ETEDDAPIIR LINALLTEAV KENASDIHIE PFENRLTVRF RVDGVLRQVL
EPPRVLAPLI TSRIKVMARL DIAEKRLPQD GRISLKVAGR AVDVRVSTLP SGHGERVVLR
LLDKQAGRLD LVQLGMDDRT LKVMQRAIHR PHGIILVTGP TGSGKTTTLY AALTQLNDRS
RNILTVEDPI EYDLDGIGQT QINPKVEMTF ARGLRAILRQ DPDVVMVGEI RDLETVQIAV
QASLTGHLVL STLHTNTAVG AITRLRDMGV EPFLLSSTVV AILAQRLVRV LCDQCKEPYA
AGETECELIG LAKEPPPTLY RAVGCDHCNG LGYRGRTGIY ELVEVDDALR NLIHDGAGEQ
QLERHARAHG PSIRADGRRR VLAGQTTVEE VLRVTKED
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