Gene Tgr7_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0205 
Symbol 
ID7316783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp225552 
End bp226478 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID643615090 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_002512291 
Protein GI220933392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.176413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGG CCTACCGCGC GCCGTTTCAC GCCGGACTGC TTGCGCCCCG CTACTGGCCC 
ACCTGGCTGG GGCTGGGCGC GGTGGCGCTG CTCAGCGTCA TGCCCCGTTT CGTCATCCGC 
GGTGCGGCCG CGGGCCTGGC GGCGCTCATG TGGCGCTTCG CCCCGAAACA GCGGCACATC 
GTCGCGGTCA ATCTGGCCCT GTGTTTTCCG GAACTGGACG AGGCGGCCCG GGAACGCCTG 
GCGCGGGAAA ACTTCCGCAC CACCGCGCAA TGCTTCGTGG ACTACGGGCT GCTCTGGTTC 
CGGGGCCCCC GCGCCCACGC CCGGCGCATC CGTTTGAGCG GCGAGGAACA CTACCGGGCC 
TGCCGGGAGG CGGGCCGGCC GGTGATCGTG CTGGCCCCCC ACGCCCCGTC CCTGGATTTC 
GGCGGCCTGC GCATGAGCCA GCTCTACGAC GGGGTGTCCT TCGCCAAGCC CATGAAGAAC 
CCGCTGGTGG AGTGGATCAA CCACAGGAGC CGCACCCAGT ACAGCGGCGA GATCTTCGCC 
CGGGAGCAGG GCCTGCGCCC GGCGCTGAAA CACATCAAGC AGGGCCGCTT CTTCTACTAC 
CTGCCCGACG AGGACCTGGG TCCGGAGCAC TCGGTGTTCG TGCCCTTCTT CGGCGTGCCC 
AAGGCCACCC TGCCCGCCCT GGGTCGCCTC GCGAAACTCA CCGGCGCCGC CGTGCTGCCC 
AGCCTGAGCG TCTACCTGCC GGAGGAGGAC GTCTACGAGA TGCGCCTGGA GCCGCCCCTG 
CAGGACTATC CGACCGGGGA TGCCGAGGAG GACGCCCGGC GCATGAACCA GGCCATCGAG 
GCGTCCATCC GCCGCCATCC CGCCCAGTAC CTGTGGACGC TGAAGTACTT CAAGACGCGG 
CCGGCGGGGG AGAAGAAGGT CTACTAA
 
Protein sequence
MAEAYRAPFH AGLLAPRYWP TWLGLGAVAL LSVMPRFVIR GAAAGLAALM WRFAPKQRHI 
VAVNLALCFP ELDEAARERL ARENFRTTAQ CFVDYGLLWF RGPRAHARRI RLSGEEHYRA 
CREAGRPVIV LAPHAPSLDF GGLRMSQLYD GVSFAKPMKN PLVEWINHRS RTQYSGEIFA 
REQGLRPALK HIKQGRFFYY LPDEDLGPEH SVFVPFFGVP KATLPALGRL AKLTGAAVLP 
SLSVYLPEED VYEMRLEPPL QDYPTGDAEE DARRMNQAIE ASIRRHPAQY LWTLKYFKTR 
PAGEKKVY