| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0196 |
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| Symbol | |
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| ID | 7316774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 214874 |
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| End bp | 215830 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643615081 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_002512282 |
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| Protein GI | 220933383 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00869838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATCCCA GCCCCAAGCT GCGCATCGTT TACGCCGGCA CGCCGGAGTT TGCCGTGCCG
GCGCTCCAGG CGCTGATCGA TTCACCCCAT GACGTGGTGG CGGTCTACAC CCAGCCGGAC
CGGCCCGCGG GGCGCGGGCG CAAGCTCACC CCAAGCCCCA TCAAGCACCT GGCCCTGGAA
CATGGCATCC CCGTGGAGCA GCCCGAGCGG CTCAAGCCCC CGGAGGTGCA GGCGCGTCTG
CGGGCCTACG CGCCCGACGT GATGGTCGTG GCCGCCTACG GGCTCATCCT GCCCAGGGCG
GTGCTGGAGA TCCCTAAACA CGGTTGCCTC AACATCCATG CCTCCCTGCT GCCCCGCTGG
CGCGGCGCCG CGCCCATCCA GCGGGCCATC CTGGCGGGGG ATGCCGAGAC CGGCGTGACC
CTGATGCAGA TGGCCGCGGG GCTGGACACC GGCGACATGC TGCTCAAGGC CGTGACTCCC
ATCGGCCCCG GGGATACCGC CCAGGAACTG CATGACCGGC TGGCCGAGCA GGGTGCACAA
TTGCTGCTGG ATTGTCTTGA GGACCTGCAG GCCGGCCGGC TCAGGCCCGA GCCCCAGGAC
GAGGCCCTGG CCACCTACGC CGAAAAGCTC AGCAAGGCGG AGGCGGAGCT GGACTGGTTC
CTGTCCGCCG CCGCGCTGGA CCGCCAGGTG CGCGCCTTCA ACCCCTGGCC CGTGGCCTTC
ACCCACCTCG ACGGCGAGAC GCTGCGCATC TGGGCCGCCG CACCCGTGGC CTCAACGGTC
ACCGCCACCC CCGGCACCGT GGTGGCCGAG GGGCCGCAAG GCATCGACGT GGCCACCGGC
GAGGGCCTGC TGCGCCTCAC CCGCATCCAG TTTCCGGGCG GCAGGCCGCT GACGGCGGAG
CAGGTGGTTG CCGGAAGATC GCTGCTCGGC AAAAGGCTCG GCGGAAGTGC GAAGTGA
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| Protein sequence | MDPSPKLRIV YAGTPEFAVP ALQALIDSPH DVVAVYTQPD RPAGRGRKLT PSPIKHLALE
HGIPVEQPER LKPPEVQARL RAYAPDVMVV AAYGLILPRA VLEIPKHGCL NIHASLLPRW
RGAAPIQRAI LAGDAETGVT LMQMAAGLDT GDMLLKAVTP IGPGDTAQEL HDRLAEQGAQ
LLLDCLEDLQ AGRLRPEPQD EALATYAEKL SKAEAELDWF LSAAALDRQV RAFNPWPVAF
THLDGETLRI WAAAPVASTV TATPGTVVAE GPQGIDVATG EGLLRLTRIQ FPGGRPLTAE
QVVAGRSLLG KRLGGSAK
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