Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0186 |
Symbol | |
ID | 7316763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 204882 |
End bp | 205796 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643615071 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002512272 |
Protein GI | 220933373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCG TCCTGGAATA TCTCGAAGGC GTCCAATGGG AAGAGCTGAT CTTCTCCACC CTGCGCATCC TGCTCATCCT GGTCATGGCC TGGGTGATCA TGAGCGTGGT CCGGGGCGGT CTGGCCCGCA TGGAGAGAAA GCTGGTGGAG TCGGGCAAGA AGCAGGGCGA CGTGCCCTCG GAGGCCACCA AGCGCGCCGA GACCCTGGTG CGGCTGTTGC GCCAGCTGGT GCTCATCGTG GTCTGGGTGA TGGCCTTGCT GGTGATCCTC AACGAGCTGG GCGTCTCCGT GGCCCCCATC CTGGCCTCGG CCGGTGTGCT GGGCCTTGCC ATCGGCTTCG GCGCCCAGAA CCTGGTGCGG GACGTGATCA GCGGCTTCTT CTTCATCCTG GAGAACCAGG TGCGCGTGGG CGACGTGGTG GTGGTCAACG GCACCGGCGG GCTGGTGGAG TCCATCAACT TCCGTACCCT GGTGCTGCGC GACCTGGAGG GCAAGGTGCA CATCTTTCCC AACGGCACCA TCGACGCGGT CACCAACCTG ACCCGGGAGT GGTCCGCCTA CGTGTTCGAC ATCGGCGTGG CCTACAAGGA GGACACCGAC AAGGTGGTGG GCATCCTCAG GGACGTGGGT GAGGAGATCA AGGCCGACGC CGACTACGGT CCCAACATCC AGGACATCGA GATCTTCGGC GTGGACAAGT TCGACGACTC CGCCGTGGTC ATCAAGGGGC GCATCAAGAC CCTGCCCATC AAGCAGTGGT ACGTGGGCCG TGAGTTCCTG CGTCGGGTGA AGTATGCGTT CGATGCCCAG GGTGTGGAGA TCCCGTTCCC GCACCGTACC CTGTACTTCG GCGAGGCCAG CCCGCCCATC CTGGCCAGGA TGGTCAATCA GGAAGCGGGC AAGGCTCAAA GCTAG
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Protein sequence | MELVLEYLEG VQWEELIFST LRILLILVMA WVIMSVVRGG LARMERKLVE SGKKQGDVPS EATKRAETLV RLLRQLVLIV VWVMALLVIL NELGVSVAPI LASAGVLGLA IGFGAQNLVR DVISGFFFIL ENQVRVGDVV VVNGTGGLVE SINFRTLVLR DLEGKVHIFP NGTIDAVTNL TREWSAYVFD IGVAYKEDTD KVVGILRDVG EEIKADADYG PNIQDIEIFG VDKFDDSAVV IKGRIKTLPI KQWYVGREFL RRVKYAFDAQ GVEIPFPHRT LYFGEASPPI LARMVNQEAG KAQS
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