Gene Tgr7_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0100 
SymbolradC 
ID7316106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp110213 
End bp110884 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID643614989 
ProductDNA repair protein RadC 
Protein accessionYP_002512190 
Protein GI220933291 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.234069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATCA CCGACTGGCC CGCCGACGAG CGTCCGCGGG AGAAGCTCCT GAGCCGCGGC 
GCGGCGGCAC TCTCCGACGC CGAACTGCTG GCCATCTTTC TGCGCACTGG CGTCGCCGGC 
AAGACCGCCG TGGATCTCGC CCGGGAACTG CTGTCGCGAT TCGGCGGCCT GCGCCCGCTG 
TTGCAGGCAG ACCTTGTCAG CTTCTCTTCT GCCCGGGGCC TGGGCTCGGC CAAGTACGCC 
CAGCTCCAGG CCGTGCTGGA GATGGGCCGC CGGCACCTCT CCGAATCCCT TGCCCGGGGC 
GATGCCCTCA CCAGCCCCGA CGACACCCGC CGTTTCCTCG CGGCGCGCCT GCGGGACTAC 
CCCTTCGAGG TGTTCGCCTG CCTGTTCCTG GACAACCGCC ACCGGGTGAT CGCCTTCGAG 
GAGCTTTTCC GGGGCACCAT CGACGGCGCA AGCGTGCATC CCCGGGAGGT GGTACGCCGG 
GCGCTGGCCC ACAACGCCGC CGCGCTGATC CTGGCCCACA ACCATCCCTC CGGCGTGGCC 
GAGCCCTCGC GCTCAGACGA GGCCATCACC CGGCGCCTGC GCGATGCCCT GGCCCTGGTG 
GACATCCGGG TGCTGGATCA CGTGGTGGTG GGGGATTCGC TGGTGTCGTT CGCCGAGCGG 
GGGCTGCTCT AG
 
Protein sequence
MPITDWPADE RPREKLLSRG AAALSDAELL AIFLRTGVAG KTAVDLAREL LSRFGGLRPL 
LQADLVSFSS ARGLGSAKYA QLQAVLEMGR RHLSESLARG DALTSPDDTR RFLAARLRDY 
PFEVFACLFL DNRHRVIAFE ELFRGTIDGA SVHPREVVRR ALAHNAAALI LAHNHPSGVA 
EPSRSDEAIT RRLRDALALV DIRVLDHVVV GDSLVSFAER GLL