| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0079 |
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| Symbol | |
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| ID | 7316729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 78025 |
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| End bp | 80871 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643614969 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_002512170 |
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| Protein GI | 220933271 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATT CCAGTTCCAC CGGCGGGCTC AAGGCCCGCT GGAGCACCTC CCACCTGGAC
GCCGGCAATG CCGCCTACCT GGACGCCCTG TACGAGGCCT TCCTGGAGGA CCCGGCCAGC
ATCGATCCCG CCTGGCGCGC CTACTTCGAG CAGCTTCAGG CCGACACCGG CGGCGGACGC
GACCTGCCCC ACAGCCGCAT CCGCGAGGAA TTCCGCCGGC TCACCGACAC CCGGCACGGC
GCCCGTGCGG GCCTGTCCAC GGTCAACCTG GAGCACGAAC GCAAGCAGGT GCGTGTGCTG
CAGCTCATCA ACGCCTACCG CTTCCTGGGC CACCGCATCG CGCGCCTGGA CCCGCTCGGC
CTGCACCAGC CGGAGGCCAC CCCGGAGCTG ACCCTGGCCC ACCACCGCCT CGCGGAAGAG
GACCTGGACA CGGTGTTCAA CACCGGCTCC CTGAGCGGCC CGGCCGAGGC GACCCTGGGC
GAGATCCTGG ACATCCTGCA GAGCACCTAC ACCGACACCA TCGGCGCCGA GTACATGCAC
CTGATGGAGA CCGCCGAGAA GCGCTGGCTG CAGAAACGCC TGGAAGGCAG CCGCGGTCGC
CCCGGCTTCA GCACCACGCA ACAGCGTTAC ATCCTCGACC GCCTGAGCGC CGCCGAGGGC
CTGGAGCGCT ACCTGCACAG CCGCTACGTG GGCCAGAAGC GCTTCTCCCT GGAGGGCGGC
GAGAGCCTGA TCCCGATGCT GGACGAGCTC ATCCAGCGCG CCGGCGGCGC CGGCATCCAG
GAGATCGTGC TGGGCATGGC CCACCGGGGC CGGCTCAACG TGCTGGTGAA CATCCTGGGC
AAGTCGCCGC AGATCCTGTT CCAGGAGTTC GAGGGCACCC ACCGGCGCGG CAACGGCACC
GGCGACGTGA AGTACCACAT GGGCTTTTCC TCGGACATGA ACACGCCCGG CGGCCCGGTG
CACGTGGCCC TGGCCTTCAA TCCCTCGCAC CTGGAGATCG TCGGCCCGGT GGTGGAGGGC
TCGGTGCGCG CCCGCCAGAC CAACCGCCAG GACGCCGACG GCGACGAGGT GCTGCCGGTG
GTGGTCCACG GCGATGCCTC CTTCGCCGGC CAGGGCGTGG TGATGGAGAC GCTGAACATA
TCCCAGACCC GGGGCTTTTC CACCAAGGGC ACGGTGCACA TCGTCATCAA CAACCAGATC
GGCTTCACCA CCAGCACCAT GCGTGACGCC CGTTCCACCG ACTACTGCAC CGACGTGGCC
AAGATGGTCA ACGCACCCAT CCTGCACGTG AATGGCGACG ACCCGGAGGC GGTGGTGTTC
GCGGTGCAGA TCGCCTTCGA TTACCGCATG GCGTTTCGCA AGGACGTGGT CATCGACCTG
GTCTGCTACC GGCGCCATGG ACACAACGAG GCCGACGAAC CCGCCGTGAC CCAGCCGGCC
ATGTACCAGG CGATCCGCAA GCTGCCCACA ACCCGGGCCC TGTACGGTCA GCGCCTGGTG
GAGCAGGGTG TCATGAAGGA AGAGGAGGTG GAGGCGCTGG TGAGCAGCTG CCGCGACCGG
CTGGATGCCG GCGACTCCAT GGTGCCCCAC CTGTGCCAGG AACCCTCACC CTATCACCCC
ATCGCCGACT GGAACCCCTA CAAGGACCGT GAGTGGACCG AGCCCGCCGA TACACGGGTC
AGTCTCGAAA CCCTGCAGCG CCTGTGGCGC CGCCTGGAAC GCCTGCCGGA GGGCTTCGAG
CTACACCCCC GCGTCGCCAA GATCATGGAG GACCGCAGCC GCATGGCCGA GGGCGAGCTG
CCCACCGACT GGGGCTTCGG CGAGACCATG GCCTATGCCT CGCTGCTGGA GCAAGGCTAT
GCCGTGCGCC TCTCGGGACA GGACAGCGGA CGCGGCACCT TCTTCCATCG CCACGCGGTG
CTGTTCGATC AGAAGACCGG CCAGCGCTGG ATCCCGCTGC GCAAGTTCAT CGACGACGAG
TCACGCTTCC TGGTCATCGA CTCGCTGCTC TCCGAGGAGG CGGTGCTGGC CTTCGAGTAT
GGCTATGCCA CCGCCGCGCC CAACACCCTG ACCCTCTGGG AGGCCCAGTT CGGCGACTTC
GCCAACGGCG CCCAGGTGGT CATCGACCAG TTCATCAGTT CCGGCGAGCA GAAATGGGGG
CGCCTGTGCG GCCTGGTGAT GCTGCTGCCC CACGGCTACG AGGGCCAGGG CCCGGAGCAC
TCCTCGGCGC GCCTGGAGCG CTACCTGCAA CTGTGCGCCC AGCACAACAT CCAGGTGTGC
GTGCCCAGCA CGCCATCACA GATCTTCCAC CTGCTGCGCC GGCAGATGAT CCGCCCCTAC
CGCAAGCCAC TGGTGGTGAT GAGCCCCAAA AGCCTGCTGC GTCATCGACT CGCCGTGAGC
CCCCTGTCGG AATTCAGCGA TGGCCGTTTC CGCAACGTCA TCGGCGAGAT CGATGACCTG
GATGCCGGGC AGGTCGAGCG GGTGGTGATG TGCGCCGGCA AGCTCTATTA CGAACTGCTG
GAGACGCGCC GGGAGGCGGG GCTACAGAAC GTCGTCATCA TCCGCCTGGA ACAGCTCTAC
CCCTTCCCGG AGGACGAACT GGCCGAGGCC CTGGCCCCGT ACACCAAGGC CAGTGACTTC
GTCTGGGCCC AGGAGGAGCC GCTCAACCAG GGTGCCTGGT ATTCCAGCCA GCACCACATC
CGCTCGGTGC TGGGGGAGAA GCGCTACCTG CAGCACGTCA CCCGGCCGGC CTCCGCATCC
CCCGCGGTGG GCTATCTGGA AGTGCACAAG CGCCAGCAGG AAGTGGTGAT CCACAAGGCC
CTCGGGCTGC CCCTCGCGAA CGACTGA
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| Protein sequence | MNDSSSTGGL KARWSTSHLD AGNAAYLDAL YEAFLEDPAS IDPAWRAYFE QLQADTGGGR
DLPHSRIREE FRRLTDTRHG ARAGLSTVNL EHERKQVRVL QLINAYRFLG HRIARLDPLG
LHQPEATPEL TLAHHRLAEE DLDTVFNTGS LSGPAEATLG EILDILQSTY TDTIGAEYMH
LMETAEKRWL QKRLEGSRGR PGFSTTQQRY ILDRLSAAEG LERYLHSRYV GQKRFSLEGG
ESLIPMLDEL IQRAGGAGIQ EIVLGMAHRG RLNVLVNILG KSPQILFQEF EGTHRRGNGT
GDVKYHMGFS SDMNTPGGPV HVALAFNPSH LEIVGPVVEG SVRARQTNRQ DADGDEVLPV
VVHGDASFAG QGVVMETLNI SQTRGFSTKG TVHIVINNQI GFTTSTMRDA RSTDYCTDVA
KMVNAPILHV NGDDPEAVVF AVQIAFDYRM AFRKDVVIDL VCYRRHGHNE ADEPAVTQPA
MYQAIRKLPT TRALYGQRLV EQGVMKEEEV EALVSSCRDR LDAGDSMVPH LCQEPSPYHP
IADWNPYKDR EWTEPADTRV SLETLQRLWR RLERLPEGFE LHPRVAKIME DRSRMAEGEL
PTDWGFGETM AYASLLEQGY AVRLSGQDSG RGTFFHRHAV LFDQKTGQRW IPLRKFIDDE
SRFLVIDSLL SEEAVLAFEY GYATAAPNTL TLWEAQFGDF ANGAQVVIDQ FISSGEQKWG
RLCGLVMLLP HGYEGQGPEH SSARLERYLQ LCAQHNIQVC VPSTPSQIFH LLRRQMIRPY
RKPLVVMSPK SLLRHRLAVS PLSEFSDGRF RNVIGEIDDL DAGQVERVVM CAGKLYYELL
ETRREAGLQN VVIIRLEQLY PFPEDELAEA LAPYTKASDF VWAQEEPLNQ GAWYSSQHHI
RSVLGEKRYL QHVTRPASAS PAVGYLEVHK RQQEVVIHKA LGLPLAND
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