Gene Tgr7_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0074 
Symbol 
ID7316724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp71888 
End bp73249 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content59% 
IMG OID643614964 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002512165 
Protein GI220933266 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC AACCCGTTGT GGTGATCACC GAAGACGATG AGGTGATGCG CGAACTGGTC 
GTCAACGTGC TTCACGGCAT CGATGCGACG GTGATCCCGA TGGAAAGTTC CCAGGAATCC
CTGGATTTCA TCGAGAACAA CGAGGTGGCC GTGGTTGTCA CGGATCTGCG CATGCCCAGG
ATCGATGGCA TGAAGGTGCT GGATTTTGCG CGTCAGAAGA ATCCGCTCAC CCAGGTAATC
TTGATGACGG GACACGCCAC GGTGGAGTCC GCCGTGCAAA GTCTCAAGGC CGGTGCCTTC
GATTACATCT GCAAGCCTTT CGAGAACGTC GAGTTGCGGC ACACGGTGGA ACGGGCGCTT
TCGCACTGGA ATCTCAGCCG TGAGAACATG CGGCTGAGAG AGGAAAACAA GGTCTTTGCC
GAGGGCGACG TCATCATCGG CCGCTCAGCG GCCATGGACG AAGTGCATCG GCTCATCGAT
GCCGCCGCTG CCTATGACTG TTCGGTGCTG ATCACAGGTG AAAGCGGTAC CGGTAAAGAA
CTGGTCGCCA GACAGATTCA CCTGAAAAGC CCGCGGCGAG ACAACAGTTT CGTGGCGATC
AACTGCGCCG CCATCCCCGA GCAGATCATC GAAAGCGAGC TGTTCGGCTA TCAGAAGGGC
GCCTTTACCG GGGCGGAGCG CGCCAAGCCC GGGCTGTTCG AGACCGCGAA CGGCGGCACC
ATCTTCCTGG ACGAGGTCAA CAATGCCTCC CTGTCGCTGC AGGCTAAACT GTTGCGCGTG
CTGCAGGACG CGACCTTCTA CAGACTGGGC GATACCGAGC CCAGGCATGT GAATGTGCGG
GTGCTCGCCG CGACCAACCG GGATGTTCCG GGCCTCATCG CCCAGGAGAC CTTCAGGGAG
GATCTGTACT ACCGGCTGCG GGTCATCGAG ATCCACATTC CCGCCCTCAG GGACCGGCGA
GACGACGTGC CCCTGCTGGC AAATTATTTC ATCAGCAAGT ATGCCAAGCG CTTCAACAAG
CCGGTTGATG GCATGTCCAC GCAGGTGCTG GGCGCCCTGA TGCGACACGA CTGGCCCGGC
AACGTGCGTG AGCTTGAGAA CGTGATTCAG CGTGCGCTGA TTCTCTGCCA GGGCAAGGTG
ATCGATGAGG GTGTCCTGCC ACCGGAGATC TCGCGCGGCA CGGAGTTGTC GGTACGCGCC
ATCGATCACA TGCAGCCCCA GACCCTTGAA GAGGTCGAGG TCTATTTCAT CCGCAAGACA
TTGCGCGAAA CCAACGGTGA CCGAGCCCTG TGTGCCGAGA TCCTGGGCAT CGACAAGAGC
ACTCTCTGGC GCAAGATCAA ACGCTACAGC ATCGAAGAGT AG
 
Protein sequence
MNAQPVVVIT EDDEVMRELV VNVLHGIDAT VIPMESSQES LDFIENNEVA VVVTDLRMPR 
IDGMKVLDFA RQKNPLTQVI LMTGHATVES AVQSLKAGAF DYICKPFENV ELRHTVERAL
SHWNLSRENM RLREENKVFA EGDVIIGRSA AMDEVHRLID AAAAYDCSVL ITGESGTGKE
LVARQIHLKS PRRDNSFVAI NCAAIPEQII ESELFGYQKG AFTGAERAKP GLFETANGGT
IFLDEVNNAS LSLQAKLLRV LQDATFYRLG DTEPRHVNVR VLAATNRDVP GLIAQETFRE
DLYYRLRVIE IHIPALRDRR DDVPLLANYF ISKYAKRFNK PVDGMSTQVL GALMRHDWPG
NVRELENVIQ RALILCQGKV IDEGVLPPEI SRGTELSVRA IDHMQPQTLE EVEVYFIRKT
LRETNGDRAL CAEILGIDKS TLWRKIKRYS IEE