Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0074 |
Symbol | |
ID | 7316724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 71888 |
End bp | 73249 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643614964 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002512165 |
Protein GI | 220933266 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAC AACCCGTTGT GGTGATCACC GAAGACGATG AGGTGATGCG CGAACTGGTC GTCAACGTGC TTCACGGCAT CGATGCGACG GTGATCCCGA TGGAAAGTTC CCAGGAATCC CTGGATTTCA TCGAGAACAA CGAGGTGGCC GTGGTTGTCA CGGATCTGCG CATGCCCAGG ATCGATGGCA TGAAGGTGCT GGATTTTGCG CGTCAGAAGA ATCCGCTCAC CCAGGTAATC TTGATGACGG GACACGCCAC GGTGGAGTCC GCCGTGCAAA GTCTCAAGGC CGGTGCCTTC GATTACATCT GCAAGCCTTT CGAGAACGTC GAGTTGCGGC ACACGGTGGA ACGGGCGCTT TCGCACTGGA ATCTCAGCCG TGAGAACATG CGGCTGAGAG AGGAAAACAA GGTCTTTGCC GAGGGCGACG TCATCATCGG CCGCTCAGCG GCCATGGACG AAGTGCATCG GCTCATCGAT GCCGCCGCTG CCTATGACTG TTCGGTGCTG ATCACAGGTG AAAGCGGTAC CGGTAAAGAA CTGGTCGCCA GACAGATTCA CCTGAAAAGC CCGCGGCGAG ACAACAGTTT CGTGGCGATC AACTGCGCCG CCATCCCCGA GCAGATCATC GAAAGCGAGC TGTTCGGCTA TCAGAAGGGC GCCTTTACCG GGGCGGAGCG CGCCAAGCCC GGGCTGTTCG AGACCGCGAA CGGCGGCACC ATCTTCCTGG ACGAGGTCAA CAATGCCTCC CTGTCGCTGC AGGCTAAACT GTTGCGCGTG CTGCAGGACG CGACCTTCTA CAGACTGGGC GATACCGAGC CCAGGCATGT GAATGTGCGG GTGCTCGCCG CGACCAACCG GGATGTTCCG GGCCTCATCG CCCAGGAGAC CTTCAGGGAG GATCTGTACT ACCGGCTGCG GGTCATCGAG ATCCACATTC CCGCCCTCAG GGACCGGCGA GACGACGTGC CCCTGCTGGC AAATTATTTC ATCAGCAAGT ATGCCAAGCG CTTCAACAAG CCGGTTGATG GCATGTCCAC GCAGGTGCTG GGCGCCCTGA TGCGACACGA CTGGCCCGGC AACGTGCGTG AGCTTGAGAA CGTGATTCAG CGTGCGCTGA TTCTCTGCCA GGGCAAGGTG ATCGATGAGG GTGTCCTGCC ACCGGAGATC TCGCGCGGCA CGGAGTTGTC GGTACGCGCC ATCGATCACA TGCAGCCCCA GACCCTTGAA GAGGTCGAGG TCTATTTCAT CCGCAAGACA TTGCGCGAAA CCAACGGTGA CCGAGCCCTG TGTGCCGAGA TCCTGGGCAT CGACAAGAGC ACTCTCTGGC GCAAGATCAA ACGCTACAGC ATCGAAGAGT AG
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Protein sequence | MNAQPVVVIT EDDEVMRELV VNVLHGIDAT VIPMESSQES LDFIENNEVA VVVTDLRMPR IDGMKVLDFA RQKNPLTQVI LMTGHATVES AVQSLKAGAF DYICKPFENV ELRHTVERAL SHWNLSRENM RLREENKVFA EGDVIIGRSA AMDEVHRLID AAAAYDCSVL ITGESGTGKE LVARQIHLKS PRRDNSFVAI NCAAIPEQII ESELFGYQKG AFTGAERAKP GLFETANGGT IFLDEVNNAS LSLQAKLLRV LQDATFYRLG DTEPRHVNVR VLAATNRDVP GLIAQETFRE DLYYRLRVIE IHIPALRDRR DDVPLLANYF ISKYAKRFNK PVDGMSTQVL GALMRHDWPG NVRELENVIQ RALILCQGKV IDEGVLPPEI SRGTELSVRA IDHMQPQTLE EVEVYFIRKT LRETNGDRAL CAEILGIDKS TLWRKIKRYS IEE
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