Gene Tgr7_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0060 
Symbol 
ID7316710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp58874 
End bp59497 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID643614950 
ProductSterol-binding domain protein 
Protein accessionYP_002512151 
Protein GI220933252 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATGA GTGTGTTGGC CGCCTTCAGC GCCGCCCTGG AAAAGGCGCT GAACGGCTAC 
CTGGAGCTGG ATCCCGACAG CCGCGAGCGG CTCGCGGCCA TGCACGGCGG CGTGGTGGCC 
CTGAGCTTCA CGCTGCCCGA GGCGACCCTC TACTTCATCC CCGGCGCCGA CCGCCTGCAG 
GTGAGCACCG CCTGCGACGC CGAGCCGGAC ACCCGCATCA GCGGTTCCCC CATCGCCCTG 
GGACGGCTGG CCCTGGCCGG TGAGACCACG CGCCTGCCGG AGGGTGTACG CCTGGAGGGC 
GATGCCCGGC TGGGCCAGCA GTTCCGCGAC CTGCTGCGGG GCGTGGACCT GGACTGGGAG 
GAGTGGCTGT CCCGGCTGAC CGGCGATCTC GTTGCCCATC GCGTCGGCGA GGCCGTGCGC 
GGCGTCACCG GCTGGGGAAG GCGCGCCGGC GAGAGCCTGC GCCTGGACCT GGGCGAATAC 
CTGCGCGAGG AATCCGGCAC CCTGCCCGGC CGTGACGAGG TGGAAGGCTT CATGGACGAC 
GTGGACCGGA TGCGCGAAGA CGTGGACCGG CTGCAGGCGC GCATTGCCCG TCTGGAACAG 
ATCCTGCGGG AACACAAGCC GTGA
 
Protein sequence
MDMSVLAAFS AALEKALNGY LELDPDSRER LAAMHGGVVA LSFTLPEATL YFIPGADRLQ 
VSTACDAEPD TRISGSPIAL GRLALAGETT RLPEGVRLEG DARLGQQFRD LLRGVDLDWE 
EWLSRLTGDL VAHRVGEAVR GVTGWGRRAG ESLRLDLGEY LREESGTLPG RDEVEGFMDD 
VDRMREDVDR LQARIARLEQ ILREHKP