| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0057 |
|---|
| Symbol | |
|---|
| ID | 7316707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 56035 |
|---|
| End bp | 57369 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643614947 |
|---|
| Product | heat shock protein HslVU, ATPase subunit HslU |
|---|
| Protein accession | YP_002512148 |
|---|
| Protein GI | 220933249 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.408482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA TGACCCCCCG TGAGATCGTC CAGGAACTGG ACAAGCACAT CGTCGGCCAG
AAGGACGCCA AGCGCGCCGT GGCCATTGCC CTGCGCAACC GCTGGCGCCG CCAGCAGCTG
CCCGAGGCCC TGCGCCAGGA AGTGACCCCC AAGAACATCC TCATGATCGG CCCCACCGGC
GTGGGCAAGA CCGAGATCGC CCGGCGCCTG GCGCGGCTGG CCAATGCCCC TTTCATCAAG
GTGGAGGCCA CCAAGTTCAC CGAGGTGGGC TACGTGGGCC GTGACGTGGA ATCCATCATC
CGCGATCTGG TCGACGCGGC CATCAAGCTG CTGCGCGAAC AGGAGATGGG CAAGGTGCGC
TTCCGTGCCG AGGAGGCCGC CGAGGAGCGC GTCCTGGACG TGCTGCTGCC CGCGCCCCGC
CAGGCGGGCT TCATGAGCGA GCCGGCCTCC GCGCCGGAGC AGAGCGAGAC GCGGCAGAAA
TTCCGCAAGC GCCTGCGCGA GGGCCAGCTG GATGACAAGG AGATCGAGAT CCAGGTGAGC
GCCACCCCCG TGGGCGTGGA GATCATGACA CCGCCGGGCA TGGAGGAGAT GGCCAGCCAG
CTGCAGAGCC TGTTCCAGAA CATCGGCGGT GGGCGCAGCC AGACCCGCAA GCTCAAGATC
CGCGACGCCA TGAAGTTGCT CACGGATGAA GAGGCCGCGC GCATGGTCAA CCAGGACGAG
CTCAAGCTGC GTGCCGTGGC CAACGTGGAG CAGAACGGCA TCGTGTTCCT GGACGAGATC
GACAAGGTGG CCAAGCGCGG TGAATACGGC GGCGCCGACG TCTCCCGCGA GGGCGTACAG
CGGGATCTGC TGCCCCTGGT GGAGGGCTGC ACCGTGAACA CCAAGTTCGG CATGGTGCGC
ACCGACCACA TCCTGTTCAT CGCCTCCGGT GCGTTTCACC TGTCCAAGCC CTCGGACCTG
ATCCCGGAGC TGCAGGGCCG CCTGCCGATT CGCGTGGAGC TGTCCGCGCT CACCGCCGAG
GACTTCGTGC GCATCCTCAC CGAGCCCGAC GCCTCGCTCA CCGAGCAGTA CAGCGCGCTG
CTCCAGACCG AGGGCGTGGA GGTGAACTTC GCCGAGGACG GCGTGCGGCG CATCGCCGAG
ATCGCCACCC GGGTCAACGA GCGCACCGAG AACATCGGCG CCCGTCGCCT GCACACGGTG
ATGGAGCGCC TGCTGGAGCA GATCTCCTTC GAGGCCCCGG ATCACCAGGG TCCGGTGAGC
ATCGACGCCG CCTACGTGGA CGAGCGGCTC GAGGAGCTGG TGCAGGATGA GGATCTGAGT
CGATATATTC TTTAA
|
|---|
| Protein sequence | MSDMTPREIV QELDKHIVGQ KDAKRAVAIA LRNRWRRQQL PEALRQEVTP KNILMIGPTG
VGKTEIARRL ARLANAPFIK VEATKFTEVG YVGRDVESII RDLVDAAIKL LREQEMGKVR
FRAEEAAEER VLDVLLPAPR QAGFMSEPAS APEQSETRQK FRKRLREGQL DDKEIEIQVS
ATPVGVEIMT PPGMEEMASQ LQSLFQNIGG GRSQTRKLKI RDAMKLLTDE EAARMVNQDE
LKLRAVANVE QNGIVFLDEI DKVAKRGEYG GADVSREGVQ RDLLPLVEGC TVNTKFGMVR
TDHILFIASG AFHLSKPSDL IPELQGRLPI RVELSALTAE DFVRILTEPD ASLTEQYSAL
LQTEGVEVNF AEDGVRRIAE IATRVNERTE NIGARRLHTV MERLLEQISF EAPDHQGPVS
IDAAYVDERL EELVQDEDLS RYIL
|
|---|
| |