Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0047 |
Symbol | |
ID | 7316697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 46068 |
End bp | 46964 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643614937 |
Product | tyrosine recombinase XerC |
Protein accession | YP_002512138 |
Protein GI | 220933239 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGTCG CCAAATCGCC CTGGATCGAT CGTTATCTCC GCCACCTGCG CGAGGAGCGT CGCTACTCCC CCCACACCGT CGAGAACTAC GCCCGGGACC TTCGCCGCCT GTGTGAAGCG GTGGGCGATG ACTGGTCCTC GGTGAAGGTC CATGACATCC GCGCCCTAGT GGCGAAGGAA CACCGCCAGG GGGCCGGCAG CAAGACCCTG CAGCGCCTGC TGTCGGCCAT CCGGGGCTTC TTCAATTACC TGATCCGGGA AGGGGTGGCG GACGCCAACC CGGCCCTGGA CGTGCGCGCG CCCAAGTCCG GGCGCAAGCT GCCCGGGGTG TTGGACGTGG ACCAGGTCGC CCGGCTGCTG GACCTGCCCG GGGACGAGGC CCTGGTGGTG CGCGACCGGG CGATCCTGGA GCTGTTCTAT TCCTCGGGCC TGCGTCTCGC CGAGCTGGTG GGTCTGGACC TGGTGGACGT GGATCTCGGC GATGCCCAGC TGCGGGTCAC CGGCAAGGGC CGCAAGGCCC GGGACCTGCC CATCGGCCGC CACGCCGTCG CGGCGCTCAA GGCCTGGCTG CCCATGCGCG CGGGGCTCGC CGCCGCCGAT GAACAGGCCC TGTTCGTGGG CCAGCGGGGC CGGCGCCTGG GGGCCCGGGC GGTGCAGACC CGGCTGGCGC GCCATGCGGG GTTGCAGGGC CTGGACCGGC GCGTGCATCC CCACCTGCTG CGCCATTCCT TCGCCAGCCA CCTGCTGGAA TCCTCCGGCG ACCTGCGCGC CGTGCAGGAG TTGCTGGGCC ATGCCGACAT CAGCACCACC CAGGTCTACA CCCATCTCGA CTACCAGCAC CTCGCCAAGG TCTACGACGC CGCCCATCCC CGGGCCCGGC GCAAGCCCTC CAGCTGA
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Protein sequence | MSVAKSPWID RYLRHLREER RYSPHTVENY ARDLRRLCEA VGDDWSSVKV HDIRALVAKE HRQGAGSKTL QRLLSAIRGF FNYLIREGVA DANPALDVRA PKSGRKLPGV LDVDQVARLL DLPGDEALVV RDRAILELFY SSGLRLAELV GLDLVDVDLG DAQLRVTGKG RKARDLPIGR HAVAALKAWL PMRAGLAAAD EQALFVGQRG RRLGARAVQT RLARHAGLQG LDRRVHPHLL RHSFASHLLE SSGDLRAVQE LLGHADISTT QVYTHLDYQH LAKVYDAAHP RARRKPSS
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