Gene Tgr7_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0047 
Symbol 
ID7316697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp46068 
End bp46964 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content71% 
IMG OID643614937 
Producttyrosine recombinase XerC 
Protein accessionYP_002512138 
Protein GI220933239 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGTCG CCAAATCGCC CTGGATCGAT CGTTATCTCC GCCACCTGCG CGAGGAGCGT 
CGCTACTCCC CCCACACCGT CGAGAACTAC GCCCGGGACC TTCGCCGCCT GTGTGAAGCG
GTGGGCGATG ACTGGTCCTC GGTGAAGGTC CATGACATCC GCGCCCTAGT GGCGAAGGAA
CACCGCCAGG GGGCCGGCAG CAAGACCCTG CAGCGCCTGC TGTCGGCCAT CCGGGGCTTC
TTCAATTACC TGATCCGGGA AGGGGTGGCG GACGCCAACC CGGCCCTGGA CGTGCGCGCG
CCCAAGTCCG GGCGCAAGCT GCCCGGGGTG TTGGACGTGG ACCAGGTCGC CCGGCTGCTG
GACCTGCCCG GGGACGAGGC CCTGGTGGTG CGCGACCGGG CGATCCTGGA GCTGTTCTAT
TCCTCGGGCC TGCGTCTCGC CGAGCTGGTG GGTCTGGACC TGGTGGACGT GGATCTCGGC
GATGCCCAGC TGCGGGTCAC CGGCAAGGGC CGCAAGGCCC GGGACCTGCC CATCGGCCGC
CACGCCGTCG CGGCGCTCAA GGCCTGGCTG CCCATGCGCG CGGGGCTCGC CGCCGCCGAT
GAACAGGCCC TGTTCGTGGG CCAGCGGGGC CGGCGCCTGG GGGCCCGGGC GGTGCAGACC
CGGCTGGCGC GCCATGCGGG GTTGCAGGGC CTGGACCGGC GCGTGCATCC CCACCTGCTG
CGCCATTCCT TCGCCAGCCA CCTGCTGGAA TCCTCCGGCG ACCTGCGCGC CGTGCAGGAG
TTGCTGGGCC ATGCCGACAT CAGCACCACC CAGGTCTACA CCCATCTCGA CTACCAGCAC
CTCGCCAAGG TCTACGACGC CGCCCATCCC CGGGCCCGGC GCAAGCCCTC CAGCTGA
 
Protein sequence
MSVAKSPWID RYLRHLREER RYSPHTVENY ARDLRRLCEA VGDDWSSVKV HDIRALVAKE 
HRQGAGSKTL QRLLSAIRGF FNYLIREGVA DANPALDVRA PKSGRKLPGV LDVDQVARLL
DLPGDEALVV RDRAILELFY SSGLRLAELV GLDLVDVDLG DAQLRVTGKG RKARDLPIGR
HAVAALKAWL PMRAGLAAAD EQALFVGQRG RRLGARAVQT RLARHAGLQG LDRRVHPHLL
RHSFASHLLE SSGDLRAVQE LLGHADISTT QVYTHLDYQH LAKVYDAAHP RARRKPSS