Gene Tgr7_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0046 
Symbol 
ID7316696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp45209 
End bp45895 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID643614936 
Productputative phytochrome sensor protein 
Protein accessionYP_002512137 
Protein GI220933238 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC ATACGAACCT GGCCGAGGAA GCGCTCAGCG AAGAGGCCGT GGAGGCTTGG 
CTGCGCAGTC ATCCGGATTT TTTCGAACGC CACCTGGCCC TGCTGGACGT GCTCAAGTTG 
CCCCACGCCT CCGGCGGCGC GGTCTCCCTG ATCGAGCGCC AGATCGGCTG GCTGCGGGAC 
AAAAACCGCC AGTTGGAAAG AAAGCTCCTG GACCTGGTGC AACTGGCCCG GGAGAACGAG 
CGCCTGAGCC AGCACATGCA TCACCTGGCC CTGGGGTTGA TGGACGCCGA CAGCCTGGAC 
GCGGTGCTGG CCACCACCCA GGAGCAGCTG CGCACCGAGT TCCGCGCCGA CCACGTGGTG 
GTCCGGCTGC TGGGTGATCC CGCCCAGGGT CTGCATTTCG TGGCCGAGGG CGACCCCGCG 
CTCAATTCCC TGGAATCCCT GTTCGAGACC CGCCGCCCCC TGTGCGGACG CCTGAGCGAT 
GAACAGCTCA CCGCACTGCT CCCCGAGGCC GACACCCCGG TGCAGTCCGC CGTGGCCGTG 
CCGCTCATGG ACGGCAACCG CCGTCTGGGC ATCCTGGCCC TGGGCAGCCG CGAGGACACC 
CGTTTCCATC CCGGCATGGG CACCCTGTTC ATCGGCTACC TGGGAGAGAT CATCTCCCAC 
GCGGTGGCGA CAAGGCTCAA GGCCTGA
 
Protein sequence
MSTHTNLAEE ALSEEAVEAW LRSHPDFFER HLALLDVLKL PHASGGAVSL IERQIGWLRD 
KNRQLERKLL DLVQLARENE RLSQHMHHLA LGLMDADSLD AVLATTQEQL RTEFRADHVV 
VRLLGDPAQG LHFVAEGDPA LNSLESLFET RRPLCGRLSD EQLTALLPEA DTPVQSAVAV 
PLMDGNRRLG ILALGSREDT RFHPGMGTLF IGYLGEIISH AVATRLKA