| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0021 |
|---|
| Symbol | |
|---|
| ID | 7316671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 18988 |
|---|
| End bp | 20445 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643614911 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002512112 |
|---|
| Protein GI | 220933213 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTGC CTTCTGTTTC TCCCGTCAGT CTTCGCACCG CCCTGCTCGC CTTCGTGCTG
CTGCCCCTGC TGGGGGTGAT GCTGCTGGTG GGCGCCTCCG GGCTGCGCGC CGTGGAGGCG
CGCCTGGAGG CGCGCATGCA ACAGGACATC GAGCTGGTGG CCCGGGCCAT CCAGCTGCCC
CTCAGCCATG CCCTGGAACG GGACCGGCGG GGCAGCGTGC AGCAGTCCCT GGATTCCGCC
TTTCGCATCG ACCAGGTCTA CGGTGCCTAT GTCTATGACG CCGCCGGCGA GCTGGTGGCC
GCCAGCGGTC CGCGCAGCCC CTCCATGGCC ATTCGCCAGC AGGCCCGGGA CCTGACCATC
GGCGGCAGCC AGGGGCTCTA CCAGGAACAG CCCGGCGGCC CGGTGTATTC CTTCTTCCTG
CCGCTCACCG ATGCCGGCGG GCGCATCAAC GGCCTGCTCC AGGTGACCCG CCACGGGGCG
GACTTCCGGG AAGACCTGGC ACAGTTGCGC GGCCAGGCCC TGGCCCTGCT GGCGGCGCTT
ACCCTGCTGT TCCTGGGGGT GGTCGTGCTG GGCCACCAGC GCGCCGTGGG CCGGCACGTG
GACCAGATGG TCAAGGCCAT GGCCCGGGTG GCCGCCGGTG AACGGCGCTG CCGGGTGGCA
CCCGCCGGGC CCCAGGAACT GCGCGGTCTC GCCAAGGCCA TGAACGCCAT GCTGGACAGC
ACCGAGCGTT CCGAGGCGGC CCTGGCTCGG CAGCAGGACG AACAGCGGGC CCTGGAGGCG
CGGCTGCGGG AATCGGAGAA GCTCGCCGCC ATCGGCCAGC TGGCCGCCGG CGTGGCCCAC
GAGCTGGGCT CGCCCCTGGG GGTGATCGAC GGCAAGGCGC AGCGCGGTCT GCGCCGGCTG
ATGGACGACG ACCCCCTCAA GAGAGACCTG GGCGAGATCC GCGCCGAGGT GGCACGCATG
GGCGGCATCG TGCGCCAGCT GATGGACTTC GGTCGGCGCA ATCCCCTGCG CCGGCGCCCG
GAATCCCTGC CGGAACTGGT GCGCGCCGAG GCGCGGCGTG TGACCCGGGG GGGATGCCGG
GTGGCGGTGG AGGTGCAGGA GGGTGGCGAG ATGCCGCCCC TGCCCCTGGA CCGGTCGCGC
CTGGAGCAGG CCCTGGGCAA CCTGCTGCGC AACGCCGTTC AGGCGGCCCG TTCCCGGGTA
CGCGTCGCCT GGTCCCATGA TGACCGGCAG GCCCGGGTGG TGGTGGAAGA CGACGGACCG
GGCATCGATC CGTCGGTGCG TGCGCGGCTG TTCGAGCCCT TTTTCACCAC CAAGGCGGTG
GGCGAGGGTA CGGGCCTGGG CCTGTCCGTG GCCCACGGGG CGGTGAGTGA CCACGGCGGC
ACGCTGGTCG TGGACCGAAG CCCCCTGGGC GGTGCCCGCT TCACCCTCAG CCTGCCCCGG
GAGGCCGGCC ATGACTGA
|
|---|
| Protein sequence | MGLPSVSPVS LRTALLAFVL LPLLGVMLLV GASGLRAVEA RLEARMQQDI ELVARAIQLP
LSHALERDRR GSVQQSLDSA FRIDQVYGAY VYDAAGELVA ASGPRSPSMA IRQQARDLTI
GGSQGLYQEQ PGGPVYSFFL PLTDAGGRIN GLLQVTRHGA DFREDLAQLR GQALALLAAL
TLLFLGVVVL GHQRAVGRHV DQMVKAMARV AAGERRCRVA PAGPQELRGL AKAMNAMLDS
TERSEAALAR QQDEQRALEA RLRESEKLAA IGQLAAGVAH ELGSPLGVID GKAQRGLRRL
MDDDPLKRDL GEIRAEVARM GGIVRQLMDF GRRNPLRRRP ESLPELVRAE ARRVTRGGCR
VAVEVQEGGE MPPLPLDRSR LEQALGNLLR NAVQAARSRV RVAWSHDDRQ ARVVVEDDGP
GIDPSVRARL FEPFFTTKAV GEGTGLGLSV AHGAVSDHGG TLVVDRSPLG GARFTLSLPR
EAGHD
|
|---|
| |