Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3114 |
Symbol | |
ID | 3580132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3639717 |
End bp | 3640643 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637686851 |
Product | hypothetical protein |
Protein accession | YP_291170 |
Protein GI | 72163513 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00051538 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTGGACT GGCTCTACAA CATCGTCGGC CAGGTGCTGG TCTGGATCCA TTCCGGTCTC AGCATCTTCC TCGACCCCGA CAGCGGGTTG GCGTGGGGAC TGTCGATCGT CCTCCTCACC ATCCTTGTGC GTGTCCTGAT GATTCCGCTG TTCGTCAAAC AGATGAACAC GCAGCGGAAG CTTCAGGAAC TCCAGCCCAA GCTCCTCAAG GTGCGCGAGC GGTACAAGAA CGACAAGCAG CGCCTCCAGC AGGAGCAGAT CAAGATCTAC CAGGAGAGCG GAACCAACCC GCTCATGGGG TGTCTGCCGC TGCTGCTGCA GATGCCGGTC TTCTTCGCCC TGTTCAACGT CCTCCGCCAG ATCGCTGAGG GGGAGGCCAA GTTCGGCTTC ACCCAGGAGC TGGCGAACAG TGCGCAGAGC GCGCTGATCT TCGGCGCTCC GATCGCCGCG CACTTCACAT CCTCGGCTGA CGAGCTGGCC GCCTTCGGGG CTGACCCGAT CATGGCCAAG GTGATCATCG CAGTCGCCTG CGTGATCATG GGCACCACGA CCTTCCTGAC CATGCGCCAG AGCATGAGCC GGACGCTCAA GCAGCCGGGG ATGGAAGACA ACCCGATGGT GCAGTCGCAG AAGATCATGA TGTACATCGC GCCGGCGTTC GGGCTGTTCG GTCTGGCGAT GCCGGTCGGT GTCCTGATCT ACTGGGTCAC CTCCAACCTC TGGACCATGG GCCAGCAGCA CTTCCTCTAC CGCAAGTTCC CTCCGGTTGC GTCGGACGGT GGGGAGAAGA ACAAGGCCGG AGTCTCTGCG ACGGGCAAAC CCGGATCGAC TAAGCGTGGT CAGCAGTCTG AGAAACCGGA ACAGCCTAAG ATCGAACGTA AGCAGCCGAA GAGGCAGCCA AGGTCCAAGA GGACCGGCGG GAAGTAG
|
Protein sequence | MLDWLYNIVG QVLVWIHSGL SIFLDPDSGL AWGLSIVLLT ILVRVLMIPL FVKQMNTQRK LQELQPKLLK VRERYKNDKQ RLQQEQIKIY QESGTNPLMG CLPLLLQMPV FFALFNVLRQ IAEGEAKFGF TQELANSAQS ALIFGAPIAA HFTSSADELA AFGADPIMAK VIIAVACVIM GTTTFLTMRQ SMSRTLKQPG MEDNPMVQSQ KIMMYIAPAF GLFGLAMPVG VLIYWVTSNL WTMGQQHFLY RKFPPVASDG GEKNKAGVSA TGKPGSTKRG QQSEKPEQPK IERKQPKRQP RSKRTGGK
|
| |