Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3001 |
Symbol | |
ID | 3579241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3514045 |
End bp | 3516510 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637686732 |
Product | ribonucleoside-diphosphate reductase |
Protein accession | YP_291057 |
Protein GI | 72163400 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGGA TCAGAAAGGT GGTAGCCGAG GCGTGCCAAG GGCTGCCCGG CGCGTCAGCA GAGACGGTGA TCGCGGAAGC CACGCGCGGG TTCTACCCGG GTATCACCCC CGCTGAGCTT GAACTCGCCC TGATCATGGC GGCGCGCACG TTCGTTGAAA CCGACCCCGA CTACTCCTAT GTCAGCGCCC GGCTCCTGTT GGACAAGCTG CGCCGGGAAG CCCTGACGTT CCTCAGCGGA CACCCGGATG AGGCCACCCA CGCCGACATG GCTCGGCGCT ACCCCGAATA CCTGCGCGCC TTCATCACGC GCGGTATCGA ACTGGAGCAC CTCACGCCCG AGCTCGCCGA CTTCGACCTG GACCGGCTCG GTGCCGCGCT CCGCCCCGAA CGCGACCTGA ACTTCACCTA CCTGGGCCTG CAGACCCTCT ACGACCGCTA CTTCCTGCAC CACGAAGGCA CCCGCTACGA ACTGCCGCAG GCGTTCCTCA TGCGGGTCGC TATGGGCGTG GCGCTCCACG AAGACGACCG GAACGCGCGG GCCATCGAGT TCTATGAACT GCTGTCGTCG TTCGACTTCA TGTGCTCCAC GCCCACCCTG TTCAACGCAG GCACCCGGCG TCCGCAGCTC TCCTCCTGCT TCCTCACCAC TGTCGGCGAC GACCTCGCGG AGATCTTCCG CGCCATCAGC AACAACGCCC TGCTGTCCAA GTACTCGGGC GGTCTCGGCA ACGACTGGAC CCCGGTGCGC GGCCTAGGCG CCCACATCAA AGGCACCAAC GGCAAAAGCC AGGGCGTCGT CCCGTTCCTC AAGATCGCCA ACGACACAGC GGTGGCGGTG AACCAGGGCG GCAAACGCAA AGGAGCGGTC TGCGCCTACC TGGAGACCTG GCACATCGAC ATCGAGGAAT TCCTCGACCT GCGGAAGAAC ACCGGTGACG AGCGCCGCCG CACCCACGAC ATGAACACCG CCAACTGGGT GCCCGACCTG TTCCTCGAAC GGGTGGAGAG CGACGCCCAG TGGACCCTGT TCTCCCCCGA CGAAGTGCCG GACCTGCACG ACCGCTACGG CGAGGACTTC GCCCGCGCCT ACGTCGCCTA TGAGCGTGCC GCGGACCGAG GGGAGATCCG CGTGTTTCGC CGGGTGCGCG CCGTGGACTT GTGGCGGCGC ATGCTCACCA TGCTGTTCGA GACCGGGCAC CCGTGGATCA CCTTCAAAGA CCCGTGCAAC CTGCGGTCCC CGCAGCAGCA CGCCGGGGTC GTCCACTCGT CCAACCTGTG CACCGAGATC ACCCTCAACA CCAGCCTCGA CGAGGTCGCT GTCTGCAACT TGGGCTCGGT GAACCTGGCC AACCACGTCG GCCCCGACGG GTTGGACGCG GAACGGCTGC GCCGCACCGT GCGCACCGCG GTGCGCATGC TCGACAACGT CATCGACGTG AACCTGTACA CCATCCCCGA GGCGGAACGC GCCAACATGC GGCACCGCCC GATCGGCCTG GGGCTGATGG GCTACCAGGA CGCGCTGTTC ACGCTGCGGC TGCCCGTCGC CTCCCCCGAG GCCGTGGAGT TCGCGGATGA GAGCATGGAG CTGCTCAGCT ACTACGCCAT CGAAGCGTCC GCGGACCTGG CGGCGGAACG CGGCAGCTAC TCCTCGTTTG AAGGGTCGTT GTGGAGCAGA GGCATCCTGC CGATCGACTC GCTGGAGCTG CTCGCTGAGG CGCGCCGCGG CGACCTGGAT GTGGACCGCA CCCAGCGGCT GGACTGGGAC ACGCTGCGGG AGAAGGTGCG CACCACGGGG ATGCGCAACT CCAACGTGAT GGCGATCGCG CCCACCGCCA CCATCGCCAA CATCGTCGGA GTCAACCCGT CGATCGAGCC GCTCTACCGC AACCTCTACG TCAAAGCGAA CATGTCCGGC GACTTCACCG TCGTCAACCC TTCCCTGGTG CGCGACCTGA AAGAGCGCGG CCTGTGGGAC GAGGAGATGG TGACGGCGTT GAAGCTCCAC GACGGCAGCC TCGGCCCGAT CGACCGGGTG CCCGAGGACT TGAAGAACCT GTACGCCACC GCTTTCGAAA TCGACCCGAT CTGGCTGGTC GACGCCGCAT CCCGGCGGCA GAAGTGGATC GACCAGGCGC AGTCGTTGAA CCTCTACATG GCTGAGCCGA GCGGCCGCAA GCTCGACGAG CTGTACCGGC GGGCCTGGCG CAAAGGCTTG AAGACCACCT ACTACCTGCG GTCGCAGGGG GCGACGCACG TGGAGAAGAG CACGCTGCGG GGCACGGACG GCAGGCTCAA CGCGGTCACC CCGGTGGCGG TCTCCGCTCC CAGCCCTTCG CCGACCCCTG CCCCACGCCC GGCGGCTGCA CCGCCGCGGT CCGCCGCCGG ACCGGCTCCG GACCTCACCG CCGAGGCTGC CGCGTTCTGC GCGGTGGACG ACCCCGAGTG CGAAGCCTGC CAGTAG
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Protein sequence | MERIRKVVAE ACQGLPGASA ETVIAEATRG FYPGITPAEL ELALIMAART FVETDPDYSY VSARLLLDKL RREALTFLSG HPDEATHADM ARRYPEYLRA FITRGIELEH LTPELADFDL DRLGAALRPE RDLNFTYLGL QTLYDRYFLH HEGTRYELPQ AFLMRVAMGV ALHEDDRNAR AIEFYELLSS FDFMCSTPTL FNAGTRRPQL SSCFLTTVGD DLAEIFRAIS NNALLSKYSG GLGNDWTPVR GLGAHIKGTN GKSQGVVPFL KIANDTAVAV NQGGKRKGAV CAYLETWHID IEEFLDLRKN TGDERRRTHD MNTANWVPDL FLERVESDAQ WTLFSPDEVP DLHDRYGEDF ARAYVAYERA ADRGEIRVFR RVRAVDLWRR MLTMLFETGH PWITFKDPCN LRSPQQHAGV VHSSNLCTEI TLNTSLDEVA VCNLGSVNLA NHVGPDGLDA ERLRRTVRTA VRMLDNVIDV NLYTIPEAER ANMRHRPIGL GLMGYQDALF TLRLPVASPE AVEFADESME LLSYYAIEAS ADLAAERGSY SSFEGSLWSR GILPIDSLEL LAEARRGDLD VDRTQRLDWD TLREKVRTTG MRNSNVMAIA PTATIANIVG VNPSIEPLYR NLYVKANMSG DFTVVNPSLV RDLKERGLWD EEMVTALKLH DGSLGPIDRV PEDLKNLYAT AFEIDPIWLV DAASRRQKWI DQAQSLNLYM AEPSGRKLDE LYRRAWRKGL KTTYYLRSQG ATHVEKSTLR GTDGRLNAVT PVAVSAPSPS PTPAPRPAAA PPRSAAGPAP DLTAEAAAFC AVDDPECEAC Q
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