| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2967 |
|---|
| Symbol | |
|---|
| ID | 3581891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3475794 |
|---|
| End bp | 3476294 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637686698 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_291023 |
|---|
| Protein GI | 72163366 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATG ACGCCCGAGG CCTAATCCAG GCGACGCGGA CCTTTCCGGG AACGGCCGAG
AACTGCGGCC GGGCGCGTTC TTGGGTCCGC TCTCTGCTCC TTGCATATCC GAGCATCCGC
GACTCGGTGG AACTGGTGGT CAGCGAGCTC TTCACCAACG CGATCAGACA CACGGCGTCC
GGGGAGCCAG GCGGAGCGGT CCGGGTCACG GTACGGACCG AAGGCGACCC ACCCGTCCTG
CTGCGGTTGG AAATCACCGA CGAAGGCCGA CGCGAACCCA TGCCCGCACA GGTAGCACGC
GCCATGCTGC CGCCGGAGGA CGCACAGAGC GGACGGGGCT TGTTCATCGC TTCAGCGCTC
TCCTACGCGT GGGGGCGTCT TCCAGCCAGC AACGGGGAAG TCCACCCGGC CGCCCCCACC
TTCCACCACC GACACGGGTC CATGATCACC TGGGCGGAAT TCGCGCTCCG CCCGGAACTG
CAAATGGCTG CCAGCCCGTG A
|
|---|
| Protein sequence | MSDDARGLIQ ATRTFPGTAE NCGRARSWVR SLLLAYPSIR DSVELVVSEL FTNAIRHTAS
GEPGGAVRVT VRTEGDPPVL LRLEITDEGR REPMPAQVAR AMLPPEDAQS GRGLFIASAL
SYAWGRLPAS NGEVHPAAPT FHHRHGSMIT WAEFALRPEL QMAASP
|
|---|
| |