Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2953 |
Symbol | |
ID | 3580352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3463623 |
End bp | 3464330 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637686684 |
Product | putative transcriptional regulator |
Protein accession | YP_291009 |
Protein GI | 72163352 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCGTAC TTCCTGTCAC CGACGGCGAG ACAGGTTTCA CTGCCGAGCT GGGACGGCGG CACGCTGACC TTTTCGAAGC CTTCTACCAG CATCCGTTCC TCAAAGGCTT GCGGGAAGGC AGTCTCAGCC GGGAGCAGGT GCTGCACTAT GTCGCGCAGG ACTACCAGTA CTTGACCGCG TACACCCGCT GCTACGGGCT GGGGATGGCG CTCTCCCCCG ACCGGCGGTG GATGCGGTTC TTCCACGACA ACGCTGCCGT GATCCTCTGC GCGGAAACCC ACGCGCACGA GTCGCTGTGC GCGTACGTGG GGGTGTCCTA CGAGGAGGCG CAGGCGGACC ATCTGGCGCC CACTGCTCAG GCGTACATCA ACCACATGAT GGAGGCGGGC CGGGACACTC TCGGCGTGCT GCTGTCCGCT CTGCTGCCGT GCCCGTGGAC CTACCTGTGG GCGGCGGCCC GGTTCACCAG CGAAACCCCG CTGGACCCCA GCCACCCCTT CTACGGCTGG TGGGACTTTT ACGCGGGCCT GTACGAGTCC CAGAAGCTCA CCCAAACCCG GGCCATGCTG GACGAGTTGG CTGCCGCGGC GGGTCCCGCT GAGCGGGAGC GCATGGAGCG GGCATTCGTC GCGAGCTGCC ACTACGAGAT CCGGTTCTGG GAGATGGCCT GGTCTTTGGA GGACTGGACT CCGCCGAACG GCTCCTGA
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Protein sequence | MGVLPVTDGE TGFTAELGRR HADLFEAFYQ HPFLKGLREG SLSREQVLHY VAQDYQYLTA YTRCYGLGMA LSPDRRWMRF FHDNAAVILC AETHAHESLC AYVGVSYEEA QADHLAPTAQ AYINHMMEAG RDTLGVLLSA LLPCPWTYLW AAARFTSETP LDPSHPFYGW WDFYAGLYES QKLTQTRAML DELAAAAGPA ERERMERAFV ASCHYEIRFW EMAWSLEDWT PPNGS
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