Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2943 |
Symbol | |
ID | 3580210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3455521 |
End bp | 3456261 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637686673 |
Product | GntR family transcriptional regulator |
Protein accession | YP_290999 |
Protein GI | 72163342 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCAACA TGTCAGGTCT GGAGTTCACG CCTCCTAAAT ACGTACAGAT TGTCCGAACG CTCCAAGAGC GGATCGAAGA CGGCACCTAC CCGGTAGGCG AGAAGCTGCC CTCCGAGACG CGTTTGGTGC GTGAATTCGG CGCGGGGCGG TCTACGGTTG TTCGTGCTCT CCAGATCCTC AGCATGCAGG GGTGGATCGA ACGCGAGCAC GGACGCGGTT CGTTCGTCAA GGGTGTTCCT CACCAGGCTG TCGAACGTTC GCGCGCCGGG GCGAGTGCCT TTGAGGCTCC TGAGAACTCC AAGAGCGACC GGATCGTCCG TGCGGGACGA ATGTCCATTC CCGCGACCAT CGCCGAGGTG ATCGGCCTGC CCGAGAACGC TCCGGCGATC ATGCGGCGAC GCCTGGTGCT CGACGACGGC AAACCGAGCG AGTTGGTGAC GCTGTGGTTT CCTCTGGACG TGGCAGAAGG AACGGATCTC GGGGACCTCG CCCCGATCAG CATCGGTGCC CGTGAACACA TCCAGCGTGT CAAGCAACTC CGTCCTTCAC TGGTCTTCGA GCGGCTCAGC GCACGACTAG CCACCGATGA GGAGAATGAA CTCCTTGGGC TCGAAAAGGG AACCCCCGTG CTTGGGATCC TCGCGCGGAT AGTGGACACT TCGGGGGAGG TGCTTGCCGT CGCCGAAGTA GTTCTCCCCG GTGACCTGCA TGAACTGGAA GACTCCTACT CGGCTGTGTA G
|
Protein sequence | MVNMSGLEFT PPKYVQIVRT LQERIEDGTY PVGEKLPSET RLVREFGAGR STVVRALQIL SMQGWIEREH GRGSFVKGVP HQAVERSRAG ASAFEAPENS KSDRIVRAGR MSIPATIAEV IGLPENAPAI MRRRLVLDDG KPSELVTLWF PLDVAEGTDL GDLAPISIGA REHIQRVKQL RPSLVFERLS ARLATDEENE LLGLEKGTPV LGILARIVDT SGEVLAVAEV VLPGDLHELE DSYSAV
|
| |