Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2928 |
Symbol | |
ID | 3580194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3442127 |
End bp | 3443068 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637686657 |
Product | glycine betaine transport system permease protein |
Protein accession | YP_290984 |
Protein GI | 72163327 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACCCA CCAAGCGCAC CCGGCGCTTC GCCACGGTTG CTGCTGGACT TACTTCATTG GTCCTGCTGG CCACTGCCTG CGGAGGAGAC GGGGGTAGCG GCCTGGCGGG CGGAGACGAA GCTTCGGGGC ACGACGGCAA ACAGATTGAG ATCGCCCTCA TCCCGTGGGA AGAAGCCATC GCTACCACCC ACATGTGGAA GGTGATCCTC GAAGAACTCG ACTACGAGGT GACGATCACC GAGGTCGACG TGGCGCCCAT GTACCAGGGG GTGGCCAACG GCGACATCGA CATGTTCCTG GACACGTGGC TTCCTCTCAC CCACGGCGAC TACTGGGAGG AGTACGGCGA GCAGGTGGAG GACCTCGGCG CCTGGTACGA CAACGCGGTG CTGACCCTCA CCGTCCCCTC GTATGTGGAC GAGGTGGACT CCATCGCCGA CCTGGCCGAC CACGCCGACC TGTTCGGCGG CCGGATCGTC GGTATCGAAT CCGGGTCGGG CCTGGTGCGT ACCACTAAGG AAGAGGCGAT CCCCACCTAC GGCCTGGACG ACTACGAGCT GATCGAGTCC TCGACCGCGG CGATGCTCGC CGAGCTGGAC TCGGCGATCT CCGACGAGGA GCCGATCGTG GTCACCTTGT GGCGGCCGCA CATCGCCTAC GCCCAGTACG ACCTGAAGGA CCTGGAGGAC CCTGAAGGCG CGATGGGCGG CGCGGAGGAG ATCCACGCTG TGGGCCGCAA GGGCTTCAGC GAGGACTTCC CCGAGCTCGC CGAGTGGCTC CGCAACTTCG AGCTCAGCGA CGAAGAGTTG AGCTCCTTGG AACAGGCCGT GCTCGCTGAC CACGAGGACG ACCCGGAGGC GGGGGCCCGC GAGTGGCTGA CCGCCAACCC CGAGTTCCTC GAGCGCACCC TGGGTGACGC GGCGAAGGAC CTCTCCTTCT GA
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Protein sequence | MKPTKRTRRF ATVAAGLTSL VLLATACGGD GGSGLAGGDE ASGHDGKQIE IALIPWEEAI ATTHMWKVIL EELDYEVTIT EVDVAPMYQG VANGDIDMFL DTWLPLTHGD YWEEYGEQVE DLGAWYDNAV LTLTVPSYVD EVDSIADLAD HADLFGGRIV GIESGSGLVR TTKEEAIPTY GLDDYELIES STAAMLAELD SAISDEEPIV VTLWRPHIAY AQYDLKDLED PEGAMGGAEE IHAVGRKGFS EDFPELAEWL RNFELSDEEL SSLEQAVLAD HEDDPEAGAR EWLTANPEFL ERTLGDAAKD LSF
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