Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2731 |
Symbol | |
ID | 3581741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3210163 |
End bp | 3211854 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637686454 |
Product | uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase |
Protein accession | YP_290787 |
Protein GI | 72163130 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0007] Uroporphyrinogen-III methylase [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.510631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCCGC AGACTGAGAC CCCGGCTACC GGGGCCGAGC ACGCCGCCAA GCCCGCCGCC GGTCACATCG CGCTGGTGGG TGCTGGACCG GGCGACGCCG AGCTGCTGAC ACTGCGGGGC GCCGCGCTGC TGGGTCAGGC CGACGTCGTC CTCACGTTCC GTGAACCGCC GCATCTTGCC CGGCACCGGA AAGGGCTGCT GAGCCACTGC CGCCCTGACA CGGTCATCGT CGACCCGGAC GAGTACGGGG ACAGCGGTGA CGCGTTCGCG CTCTCCAAGG CTGCGCAAGG ACTGCGTGTC GTCCGCCTCT ACCCGGGCGA CCCGCTGCTG AGCGGCCAGG GCGCGGCTCT TGCCGAGGCT GCCAGCGACG CGGGGATCGA GTTCGAGATC GTGCCGGGGC TCTCCTCGAT TACCGCCGTC CCTGCCTACG CGGGAACCGA GCTGCTGCCG CACGGCACCA ACGAGGTGCG GATCCTCGAC GCTGCCGACA CTGACGTGGA CTGGGTCAAC GCTGCGCAGA GCAAGGCGAC CCTGGTCGTG CTCCACCCGG ATGCGCCCAC CGAGGACGAT CCGGACGCGA AAGGCCCCGG CCTCGACCGG ATCTGCAAGA CCTTGATCGC CGGCGGTCGG CCCGACACCA CACCGGTCAC GGTGACCCGG ATGGGGACGA CCACCTACCA GACCACTATC ACCTCAACCC TGGCCCGGCT GGCGGCCGAT CTGAAAGCCG CCGACGCCAA GGGGCACACC ATCCCCCGTC CGTCGCTGCT CATCGTCGGG GAAGGGGTGG CGCAGCGCCA GAAGAAGCTG TCCTGGTTCG AAACCAAGCC CTTGTTCGGC TGGCGGGTCC TGGTGCCGCG CACCCGCCAG CAGGCCCCGG CCCTCTCCGA GCAGTTGCGC AGCTACGGCG CGGTACCCGA GGAGGTGCCG ACGATCTCGG TGGAGCCGCC GCGCACACCG CAGCAGATGG AGCGGGCGGT CCGCGGCCTG GTCACCGGAC GCTACCAGTG GGTGGCGTTC ACCTCGGTGA ACGCGGTCAA AGCCATCCGG GAGCGTATCG AAGACTACGG TTTGGATGCG CGGGCTTTCG CCGGGGTGAA AGTCGCCGCG GTCGGGGAGC AGACCGCGGC CGCGCTCCGC GCCTTCGGCA TCCACCCGGA CCTGCAGCCG CCGGAGGACA AGCAGTCCGC GGCCGGGCTC GTTGAAGTGT GGCCGCCCTA CGACCCGGAT ATCGACCCGA TCGAGCGGGT CCTGCTGCCC CGCGCCGACA TCGCCACCGA GGTCCTCTCC GAAGGCTTGG TGAACCTCGG CTGGGAGGTC GACGACGTCA CCGCCTACCG GACGGTGCGG GCCGCACCCC CGCCCGCACC TATCCGCGAA GCCATCAAGG GCGGCGGGTT CGACGCGGTG ATGTTCACCT CGTCCTCCAC GGTCCGCAAC CTCGTCGGGA TCGCGGGCAA GCCGCACGCC ACCACCGTGA TCGCCGTGAT CGGGCCGGAG ACCGCGAAAA CCGCGGAAGA GTTCGGCCTG CGTGTCGACG TCCGCGCGCC GAAGGCGTCG GTGGCAGCGC TGGCCGAAGC GCTCGCAGAG TTCGGTGCCG CCCAGCGGCA GGCGGCGATC GAAGCGGGCA AGCCCGTGCT GCGGCCCAGC CAGAAGCGCC GGGGGCGTCG CCGTAAGAAC CTCATGATCT GA
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Protein sequence | MNPQTETPAT GAEHAAKPAA GHIALVGAGP GDAELLTLRG AALLGQADVV LTFREPPHLA RHRKGLLSHC RPDTVIVDPD EYGDSGDAFA LSKAAQGLRV VRLYPGDPLL SGQGAALAEA ASDAGIEFEI VPGLSSITAV PAYAGTELLP HGTNEVRILD AADTDVDWVN AAQSKATLVV LHPDAPTEDD PDAKGPGLDR ICKTLIAGGR PDTTPVTVTR MGTTTYQTTI TSTLARLAAD LKAADAKGHT IPRPSLLIVG EGVAQRQKKL SWFETKPLFG WRVLVPRTRQ QAPALSEQLR SYGAVPEEVP TISVEPPRTP QQMERAVRGL VTGRYQWVAF TSVNAVKAIR ERIEDYGLDA RAFAGVKVAA VGEQTAAALR AFGIHPDLQP PEDKQSAAGL VEVWPPYDPD IDPIERVLLP RADIATEVLS EGLVNLGWEV DDVTAYRTVR AAPPPAPIRE AIKGGGFDAV MFTSSSTVRN LVGIAGKPHA TTVIAVIGPE TAKTAEEFGL RVDVRAPKAS VAALAEALAE FGAAQRQAAI EAGKPVLRPS QKRRGRRRKN LMI
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