| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2716 |
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| Symbol | |
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| ID | 3580695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3193086 |
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| End bp | 3194120 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637686439 |
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| Product | alanine-rich protein |
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| Protein accession | YP_290772 |
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| Protein GI | 72163115 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGACG CAGACATCGT GCACGCGATC GCGAAGGACG AGCGGGACGG GCTGAGCGCG
GCGTACCGGG CCTACGCCGA CCGCCTCTAC GACTACAGTC TGGTCACGCT CGACGACGCT
GAAGCCGCCG CTGACACGGT GCACGACGTC TTCCTCATCG CACGCGAACA GATCGCCCGC
TTGCGGGACA CCCACGCACT CCGCCCCTGG CTCTATGCGC TCACCCGTGC CCAATGCCAC
CGGGCATTGC GTCTCCGCGA CGGCCATCCA CCTCCCGACC TGCTGGACGG GCACCCCTCC
CACGCCACCC TGTCCCCCGA CGATCCCCGA CTCCTCCTCC ACGAAGCCCT CTGCGGTCTT
CCCCCGCACG AACGCGAAAT CCTCCACCTG ACCGTGCGAC ACCAGCTCGC AGGACCAGAA
CTGGCCGCAA TTCTCGGGAC CAGCCGCAGG CGCGCCGACG CGAGAGCCGC TGCAGCGCAC
GCGAGTTTTA CCGACGCGGT CGGCGTCCTC CTCGCCGTCC GGCGCACAGA AGCGCACTGC
CCGGCGCTGC GCACCCTCCT CCAGCCGTGG GACGGCGGGC ACCTCACTCC GGCGTGGCGC
AAACGCATCA CCCGCCACCT GAGGACGTGC CCGGACTGCG ACCGCACCCG AGCGGCCCTC
CCCGCCCCCG ACGCACTGCG GGACGCCTTC CCCCTCACCG CGCCGCCCGC GTTCCTCCAC
GACCAGCTGT TGACCAACGC TTTCGACCCC GGCCTCGCCG CCCACCACGC CGAGTTCGCC
GCCCAAGCCG GCCCGTACCG GAACGACGGC TTCCCCGCCA CCGGCGGCCC TGCCGAGGAG
ACCGCCCTGC CGTGCACTCG GCTGCCCGCC GTCCTGACCC TGGCCGCCGC CCTCCTGTTC
CTCGTGCTCA TCGGCTGGGC CGCGCTCCCC CTCCTCACCG CTGTGGTGAC CGGAAGCACC
GGCGTGGAAG CAATCCCCGT CGTCTCACTC GAACCCGCCG AGCCGCCCAG CCCTGCCTCC
TCCCCGCACA GTTGA
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| Protein sequence | MRDADIVHAI AKDERDGLSA AYRAYADRLY DYSLVTLDDA EAAADTVHDV FLIAREQIAR
LRDTHALRPW LYALTRAQCH RALRLRDGHP PPDLLDGHPS HATLSPDDPR LLLHEALCGL
PPHEREILHL TVRHQLAGPE LAAILGTSRR RADARAAAAH ASFTDAVGVL LAVRRTEAHC
PALRTLLQPW DGGHLTPAWR KRITRHLRTC PDCDRTRAAL PAPDALRDAF PLTAPPAFLH
DQLLTNAFDP GLAAHHAEFA AQAGPYRNDG FPATGGPAEE TALPCTRLPA VLTLAAALLF
LVLIGWAALP LLTAVVTGST GVEAIPVVSL EPAEPPSPAS SPHS
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