Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2618 |
Symbol | |
ID | 3580632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3092701 |
End bp | 3093717 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637686337 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_290674 |
Protein GI | 72163017 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATCG CTCAGCGTCC CACCCTGACC GAAGAGCCGA TCTCCGAGTT CCGCTCCAAG TTCATCCTTG AACCCCTGGA GCCGGGCTTC GGCTACACCA TCGGGAACTC GCTGCGCCGC ACCCTGCTGT CGTCGATTCC CGGTGCTGCC GTGACCAGCA TCCGCATCGA GGGTGTTGAG CACGAGTTCA CCACCGTGCC CGGCGTCAAG GAGGACGTTA CCGAGATCAT CCTGAACCTC AAGGGTCTCG TGGTGAGCTC GGAGCACGAC GAGCCGGTAC TGATGTACCT GCGCAAGCAG GGACCGGGAG TGGTCACCGC CGCCGATATC GCTCCGCCTG CCGGGGTCGA GGTGCACAAC CCGGAGATGC ACATCGCGAC CCTGAACAGC AAGGGCAAGC TGGAGATGGA GATGACGGTC GAACGGGGCC GTGGCTACGT CTCCGCCGCC CAGAACAAGC AGCCGGGGCA GGAGATCGGC CGGATTCCGA TTGACTCCAT CTACTCTCCC GTCATGCGGG TCACCTACAA GGTCGAGGCG ACCCGTGTCG AGCAGCGCAC CGACTTCGAC CGCCTCATCC TGGACGTCTG GACCAAGCCG GCCATCCGGC CTCGCGACGC GGTGGCCAGC GCGGGCAAGA CCCTGGTGGA GCTGTTCGGG TTGGCGCGGG AGCTCAACGT CGACGCCGAA GGCATCGACA TGGGTCCCTC TCCCACGGAC GCTGCGCTGG CCGCGGATCT GGCACTGCCG ATCGAGGACC TCAACCTCAC GGTCCGCTCC TACAACTGCC TCAAGCGCGA GGGTATCCAC ACGGTCGGCG AGCTCGTCGC TCGCACCGAG CAGGACCTGC TGGACATCCG GAACTTCGGT GCGAAGTCAA TAGAGGAAGT CAAGCAGAAG CTGAGCGACA TGGGGCTCGC GCTGAAGGAC GCCCAGGGCG GGTTCGACCC GGGGAGCGCG GCCGGTTCGT ACGGTTCCGA CCACGACCAG TCCTACGTCG AGACTGAGCA GTACTAG
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Protein sequence | MLIAQRPTLT EEPISEFRSK FILEPLEPGF GYTIGNSLRR TLLSSIPGAA VTSIRIEGVE HEFTTVPGVK EDVTEIILNL KGLVVSSEHD EPVLMYLRKQ GPGVVTAADI APPAGVEVHN PEMHIATLNS KGKLEMEMTV ERGRGYVSAA QNKQPGQEIG RIPIDSIYSP VMRVTYKVEA TRVEQRTDFD RLILDVWTKP AIRPRDAVAS AGKTLVELFG LARELNVDAE GIDMGPSPTD AALAADLALP IEDLNLTVRS YNCLKREGIH TVGELVARTE QDLLDIRNFG AKSIEEVKQK LSDMGLALKD AQGGFDPGSA AGSYGSDHDQ SYVETEQY
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