| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2594 |
|---|
| Symbol | |
|---|
| ID | 3581066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3062714 |
|---|
| End bp | 3063610 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637686313 |
|---|
| Product | membrane-bound lytic murein transglycosylase B |
|---|
| Protein accession | YP_290650 |
|---|
| Protein GI | 72162993 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCTGG CAGAGAGTGG GGTTGTGGTG GCCGAGACGC TCTCCAAAGT CCGAACCGAC
ACACCCCCCG CCTCCCCGGC GCCCAAACCC GGAATGTCGG GCGGGTGGCG TGCCTTGGGC
GTGGCGGGAG CCGCGATCGC CGCGGTGGTG GGGGTAACCG GCGGCATTCT CGGCATCGTG
GCGTTCACCG CTGAATCCTC CGCACCGCAG CTGCTGCCCC CCGGCCCCCA CGAACTCGGG
GGACGCGTGG AGACGCTCAC CGAGACCAAC GCCAGCACCG CGGAGGCGGA AGGAGTCCCG
GGCTCCCGCC CGCTGCCGTC CGACCAGCAC GCGGCCCTCC CCGAAATCGA CCCCGCATGG
CTCGACCGGG TCTCGGCTGC CACCGGAATC CCGCGCCGCG CCCTGCAGGC GTACGCGGCT
GCACAACTGC AGCTCCTCGC GGAGCAGCCG GAGTGCCAAG TGTCCTGGCC GACTCTGGCG
GCGATCGGCG AAGTGGAATC CCGCCACGGC ACCTACGCGG GCGGGGAGCT CGCCCCCGAC
GGGACCACCA CTGTCCCGGT CATCGGCATT CCCCTCGACG GGAGCCGCGG CACCGCCGCG
ATCCCTGATA CCGACGGCGG ACAGCTCGAC GGCGACCCGG TGTGGGACCG GGCTGTCGGC
CCCATGCAGT TCATCCCCAG CACGTGGGAG ATCTGGGGCG CTTCCGCGGA CAACAGCACA
CCCAACCCCC ACGACATCGA CGACGCCGCG CTGAGCGCCG CCCGCTACCT GTGCGCGGAC
GGCCGGGTGC TGACCACCAG CCAGGACTGG TGGGAAGCGA TCTTGTCGTA CAACCGGTCC
GAAGAGTACG GGCGGAAGGT TCTCTCCATC GCCGCCGACT ATGTCAACGC GCTTTAA
|
|---|
| Protein sequence | MCLAESGVVV AETLSKVRTD TPPASPAPKP GMSGGWRALG VAGAAIAAVV GVTGGILGIV
AFTAESSAPQ LLPPGPHELG GRVETLTETN ASTAEAEGVP GSRPLPSDQH AALPEIDPAW
LDRVSAATGI PRRALQAYAA AQLQLLAEQP ECQVSWPTLA AIGEVESRHG TYAGGELAPD
GTTTVPVIGI PLDGSRGTAA IPDTDGGQLD GDPVWDRAVG PMQFIPSTWE IWGASADNST
PNPHDIDDAA LSAARYLCAD GRVLTTSQDW WEAILSYNRS EEYGRKVLSI AADYVNAL
|
|---|
| |