| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2519 |
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| Symbol | fbiC |
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| ID | 3581808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2968867 |
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| End bp | 2971482 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637686235 |
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| Product | FO synthase |
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| Protein accession | YP_290575 |
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| Protein GI | 72162918 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.391262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTCCCT CGGCCGCTGC TCTGCGGCGT GCACTAGCCC GGGTCAGGGA CGGCAAGACC
CTGGACCCGA CCGAAGCGGA AATCCTCTTG CACGCCCGCG GCGACGACTT GGAGGCCCTC
CTCGACCACG CCTCCCGCAT CCGCGATGCT GGGCTTGCCG CGGCTGGACG CCCCGGCGTC
ATCACCTACA GCCGCAAAGT CTTCATCCCC CTGACCCGGC TGTGCCGGGA CCGCTGCCAC
TACTGCACGT TTGCCACCGC CCCCGCGAAA CTGTCCGCCC CCTACCTGTC CCCGGACGAG
GTGCTCGAGA TCGCCCGCCA AGGCGCGGCC CTCGGCTGCA AAGAAGCACT GTTCACCCTC
GGGGACCGGC CGGAAGACCG CTGGCCGCAA GCCCGCGCCT GGCTCGACGA GCAAGGCTAC
GACGACACCC TCTCCTACGT GCGGGCCATG GCCATCCGCG TCCTCGAAGA AACCGGGCTG
CTGCCGCACC TCAACCCGGG AGTGCTCACC TGGAGCGACT TCCAACGCCT CAAGCCGGTC
GCCCCGTCCA TGGGCATGAT GCTGGAAACC ACGGCGCGGC GGCTATTCAC GGAACGCGGC
CAAGTCCACT ACGGCAGCCC GGACAAAGAC CCCGTGGTGC GGCTGCGCGT CCTCGAAGAC
GCGGGACGCT CCACGGTCCC CTTCACCACG GGCATCCTCA TCGGCATCGG CGAAACCCTC
GCGGAACGCG TCGACTCGAT CTTCGCGATC CGCAAGATCG CCCGCCAGTA CGGCGCGATC
CAGGAAGTCA TCGTGCAGAA CTTCCGCGCC AAACCGGACA CCGCGCTGCG CGACTGGCCC
GACGCCGACC TCGAAGACCT CGCCGCCACC ATCGCCGTCA CCCGCATCCT GCTGGGCCCC
AAAGCCCACA TCCAAGCGCC GCCCAACCTC ATCACCGACG ACGGGAACCC GGAGCAGGGC
ACAGGTGACG AGTTCACGCT CATGCTGCGC GCCGGCATCG ACGACTGGGG CGGGGTCTCA
CCGCTCACCC CCGACCATGT CAACCCGGAA CGCCCCTGGC CGCAGATCGA CCTGCTCGCC
GAACGCACTG CCGCGGCAGG CTTCACCCTC CGGGAACGCC TCACCGTCTA CCCCGAATAC
GTGCGCCAAG GCGAACCGTG GATCGACCCG CGCCTCCACG ACCACGTCGC TGTCCTCGCC
GACCCGGAGA CCGGGCTGGC CCGCCCCGAC GCCGTCATCA CTGGGCGCCC CTGGCAGGAG
CCCGCCAGCC TCGAATCCGG GGGCCGGACC AACCTCCACA AGGACATCGA CACCGCAGGC
CGCAGCAGCG ACCGGCGCGG CGACTTCGAC TCCGTCTACG GCGACTGGTC GGAACTCCGC
GCACGCATCG CCCAACCCGC CCGCGACACG CGGGCACCCC ACCGGTTCGA CCCGGAGATC
CGTGCCGCCC TGCGCCGTGC CGAAGACGAT CCTGCCGGGA TCACCGACCG CGACGCCCTG
GCCCTGCTCG CCGCGGACGG CCCCGAACTG GAAGCGCTCG CCGACCTCGC CGACCGGGTC
CGCCGCGACA CCGTGGGCGA CGAGATCACC TTCGTCGTCA CCCGCAACAT CAACTTCACC
AACGTCTGCT ACACGGGATG CCGGTTCTGC GCTTTTGCGC AGCGCCGCAC CGACGCCGAC
GCCTACACCC TCTCCCTCGA ACAGGTCGCA GACCGGGCCG CCGAAGCGTG GGAGGCCGGG
GCCACCGAAG TGTGCATGCA AGGCGGGATC CACCCCGACC TGCCGGGAAC CGCCTACTTC
GACATCGCCC GGGCAGTCCG GGAGCGGACC CCCGACATGC ACATCCACGC GTTCAGCCCC
ATGGAGGTCA TGAACGGCGT GTCCCGCACC AACCTCCCGA TCCGCGAATG GCTGCTCCGG
GCCCGCGAAG CCGGACTCGA CTCCCTTCCC GGCACTGCCG CGGAGATCCT CGACGACGAC
GTGCGCTGGG TCCTCACCAA GGGGAAACTG CCCACCGCCC AGTGGATCGA GGTCATCACC
GCCGCCCACG ACCTCGGCAT CCCCACCACG GCCACGATGA TGTACGGGCA CGTGGACGCC
CCGCACCACT GGGTCGCCCA CATCCGGCTC ATCCGCTCGC TGCAGGAACG CTCCCTGGAA
CAGAACGGCC GCCCCGGGTT CACCGAATTC GTGCTGCTCC CCTTCGTGCA CACCAACGCG
CCCATCTACC TGGCCGGGCT GTCGCGGACC GGGCCCACCG AACAGGAGAA CCGGGCCGTG
CACGCCCTCG CCCGTCTCCT GCTGCACGGC GCGATCGACA ACATCCAGTG CTCGTGGGTG
AAACTGTCTG AGGAGCAGTG CCGGCGCCTC CTCGCCGGCG GCGTCAACGA CATCGGCGGC
ACCCTGATGG AAGAGACCAT CAGCCGGATG GCGGGCTCCA CCAACGGGTC GTTCAAAACC
ATCAGCGAGA TGCGCGCCAT GGTAGAACCG CTCGGACGCC CTCTGCGCCA GCGCGACACC
CTCTACCGGG AAGTGCCCGC GGAGCGCCGC GCCATCGCCG AAGCCAACGA CGGGGTGGCC
GCGAGCCTGC GCCGCACCCG GCTGCCCGTG GTCTGA
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| Protein sequence | MVPSAAALRR ALARVRDGKT LDPTEAEILL HARGDDLEAL LDHASRIRDA GLAAAGRPGV
ITYSRKVFIP LTRLCRDRCH YCTFATAPAK LSAPYLSPDE VLEIARQGAA LGCKEALFTL
GDRPEDRWPQ ARAWLDEQGY DDTLSYVRAM AIRVLEETGL LPHLNPGVLT WSDFQRLKPV
APSMGMMLET TARRLFTERG QVHYGSPDKD PVVRLRVLED AGRSTVPFTT GILIGIGETL
AERVDSIFAI RKIARQYGAI QEVIVQNFRA KPDTALRDWP DADLEDLAAT IAVTRILLGP
KAHIQAPPNL ITDDGNPEQG TGDEFTLMLR AGIDDWGGVS PLTPDHVNPE RPWPQIDLLA
ERTAAAGFTL RERLTVYPEY VRQGEPWIDP RLHDHVAVLA DPETGLARPD AVITGRPWQE
PASLESGGRT NLHKDIDTAG RSSDRRGDFD SVYGDWSELR ARIAQPARDT RAPHRFDPEI
RAALRRAEDD PAGITDRDAL ALLAADGPEL EALADLADRV RRDTVGDEIT FVVTRNINFT
NVCYTGCRFC AFAQRRTDAD AYTLSLEQVA DRAAEAWEAG ATEVCMQGGI HPDLPGTAYF
DIARAVRERT PDMHIHAFSP MEVMNGVSRT NLPIREWLLR AREAGLDSLP GTAAEILDDD
VRWVLTKGKL PTAQWIEVIT AAHDLGIPTT ATMMYGHVDA PHHWVAHIRL IRSLQERSLE
QNGRPGFTEF VLLPFVHTNA PIYLAGLSRT GPTEQENRAV HALARLLLHG AIDNIQCSWV
KLSEEQCRRL LAGGVNDIGG TLMEETISRM AGSTNGSFKT ISEMRAMVEP LGRPLRQRDT
LYREVPAERR AIAEANDGVA ASLRRTRLPV V
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