| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2490 |
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| Symbol | |
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| ID | 3580749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2931620 |
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| End bp | 2934526 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637686206 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_290546 |
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| Protein GI | 161723104 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.801958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAGGCA TACTCGACAG GGTCCTGCGC ATAGGCGAAG GCAAAATCCT GCGCAAGCTG
AATAAGCTCA AGGACCAGAT CAACTCCATC GAGGATGATT TCGTCGACCT CAGCGACGCT
GAATTGCGCG CGCTCACCGA CGAATACAAG CAGCGGCTTA AGGACGGTGA GGAGCTAGAC
GACCTGCTGC CCGAGGCTTT CGCCACCGTG CGCGAGGCGG CGAAGCGGAC CTTGGGGCAG
CGGCACTTCG ACGTGCAGCT CATGGGCGGC GCCGCGCTGC ATTTCGGCAA TATCGCTGAG
ATGAAAACCG GTGAGGGTAA GACGCTTACC GCGACACTCC CCGTTTACCT CAACGCGCTC
ACCGGTAAGG GCGTCCACGT GGTCACCGTC AACGACTACC TGGCCCGCCG CGACGCCGAG
ACCATGGGCC GCATCTACCG GTTCCTGGGC ATGGAGGTTG GTGTCATCTC CCCGGAGATG
TCCCCGGCAG CGCGCCGCAA GGCCTACCAG GCGGACATCA CCTACGGCAC CAACAACGAG
TTCGGCTTCG ACTACCTGCG CGACAACATG GCGCGGTCGC TCGACAACTG CGTGCAGCGC
GGCCACCACT ACGCCATCGT CGACGAGGTC GACTCCATTC TGATTGATGA GGCTCGCACC
CCGCTGATCA TCAGTGGTCC CGCAGAGCAG AACTCGCGCT GGTACGTCGA GTTCGCCAAG
ATCGCCCCGC GGCTGCGCCG CGACGTCGAC TACGAGGTCG ACGAGAAGAA GCGCACCGTC
GGCATCACCG AGGCCGGGGT GGCCAAGGTC GAGGACTGGC TGGGGATCGA CAACCTCTAC
GAGTCGGTCA ACACTCCGCT GATCAGCTTC CTCCACAACG CCATCAAGGC CAAGGAGCTC
TACCGCAGGG ACCGGGACTA CATCGTCAAG GACGGCGAGG TGCTCATCGT CGATGAGTTC
ACCGGCCGTA TCCTGCGGGG CCGCCGCTAC AACGAGGGCA TGCACCAGGC CATTGAGGCC
AAAGAGAAAG TCAAGATCAA GGAAGAGAAC CAGACTCTCG CCAAGATCAC CCTGCAGAAC
TACTTCCGGC TCTACGAGAA GCTGGCCGGC ATGACCGGTA CGGCGGTCAC GGAGGCGGCA
GAGTTCCAGC AGACCTACAA CCTGGGTGTC GTGCCCATCC CCACCAACAA GCCCATGATC
CGCGAGGATC TGCGGGACTT GGTCTACAAG ACCGAGGAGG CCAAGTTCCA GGCGATTGTC
GAAGACATCG CCGAGTGCCA CGAGCGGGGC CAGCCGGTGC TGGTGGGTAC GACTAGCGTG
GAGAAGTCCG AGCTGCTGAG CAAGATGCTC AAGCGGCGCG GGATCCCGCA CGAGGTCCTC
AACGCCAAGA ACCACGCCCG GGAGGCGGCC ATCGTGGCCC GGGCCGGCAA GCTCGGCGCG
GTTACCGTGG CCACCAACAT GGCCGGTCGC GGTACCGACA TCATGCTCGG CGGCAACCCG
GATTTCATTG CAGCCGAAGA GCTGCAGGAA CGTGGCCTCT CCCCCCTCGA GACCCCCGAA
GAGTACGAGA AGGCCTGGCC GGAGGCGCTG GAGCGGGCCA AGAAGGAAGT CGAAGCCGAG
CACCAGAAGG TGGTTGAGCT CGGCGGCCTG TACGTGCTGG GCACCGAACG CCACGAGTCC
CGGCGGATCG ACAACCAGTT GCGCGGTCGT GCCGGACGCC AGGGCGACCC CGGCAAGTCC
CGCTTCTACC TGTCGCTCGG CGACGACCTG ATGCGGCTGT TCAACGGCGA GCGGGTTCAG
ATGATCATGA ACCGGCTGAA CCTGCCTGAC GACCAGCCGA TCGAGCACAA GATGGTCACC
AAGGCCATCC AGAGTGCGCA GGGCCAGCTC GAGCAGCAGA ACTTCGAGAT CCGCAAGAAC
GTCCTCAAGT ACGACGAGGT CCTCAACCGG CAGCGCCAGG TGATCTACGC CGAGCGCCGC
AAGGTGCTGG AAGGTGCTGA CCTCCGCGAG CAGGTCCGGA GCATGATCGA CGACGTGCTC
GACTCCTACG TCCGCTCGGC GACCGCCGAA GGCGACCCGG AGGACTGGGA CCTCGAACAC
CTGTGGACGG CCTTCAGCCA GATCTTCCCG GTGAGCTTCA CCGCCGACCA GCTCATCGAG
GAGAACGGCG GGGACATCAG CGTGCTGACC CCGGACATCA TCAGCCAGCG GGTCCGGGAG
GACGCCCACG AGGTCTACGA CCGCCGCGAG GCCGAGATCG GCGAGGAGAC CATGCGCGAG
GTGGAGCGCC AGGTCATCCT CCAGGTCATG GACCGCAAGT GGCGGGAGCA CCTCTACGAG
ATGGACTACC TCCAAGAGGG CATCGGCCTG CGTGCCATGG CGCAGCGCAA CCCGCTGATC
GAATACCAGC GGGAAGGCTA CGACATGTTC CAGGAGATGC TCGAAGGCAT CAAGGAGGAG
TCGATCCGCT TCCTGTTCAA CGTCGAGGTC CGGGTGAACC AGCCGCAGGA GTCCCAGATC
ACTGCGGCTT CCGCGGCGGC CACGGCCTCC GCGATTCCCC TGGTGGCGCC TGAGGCCGAG
AAGACGGAGG ACAAGGCGGA GGACGCCCAG GAAGCGGAGG AGTCCGCTGC GTCCGCCGAG
GCTGCGGAGT CCGCGAAGGA CACCGCGCAG GACAAGGACG CCGAGTCCGT AGCGAAGAAG
GCGCAGGCCG TGGTCCCCGC GCTGGGCAAG GAGGAGAAGC AGCCCGAGAA GCTGCAGTAC
TCCGGTCCCA GTGAGGGCGG CGGTGTCGAG AAACGCACCG AGGACACCGG TCCGGACTAT
GCGAACACCC CGCGCAACGC GCCCTGCCCC TGCGGCTCCG GCAAGAAGTA CAAGAAGTGC
CATGGCGCGC CTAAGTCGCG TGTGTGA
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| Protein sequence | MPGILDRVLR IGEGKILRKL NKLKDQINSI EDDFVDLSDA ELRALTDEYK QRLKDGEELD
DLLPEAFATV REAAKRTLGQ RHFDVQLMGG AALHFGNIAE MKTGEGKTLT ATLPVYLNAL
TGKGVHVVTV NDYLARRDAE TMGRIYRFLG MEVGVISPEM SPAARRKAYQ ADITYGTNNE
FGFDYLRDNM ARSLDNCVQR GHHYAIVDEV DSILIDEART PLIISGPAEQ NSRWYVEFAK
IAPRLRRDVD YEVDEKKRTV GITEAGVAKV EDWLGIDNLY ESVNTPLISF LHNAIKAKEL
YRRDRDYIVK DGEVLIVDEF TGRILRGRRY NEGMHQAIEA KEKVKIKEEN QTLAKITLQN
YFRLYEKLAG MTGTAVTEAA EFQQTYNLGV VPIPTNKPMI REDLRDLVYK TEEAKFQAIV
EDIAECHERG QPVLVGTTSV EKSELLSKML KRRGIPHEVL NAKNHAREAA IVARAGKLGA
VTVATNMAGR GTDIMLGGNP DFIAAEELQE RGLSPLETPE EYEKAWPEAL ERAKKEVEAE
HQKVVELGGL YVLGTERHES RRIDNQLRGR AGRQGDPGKS RFYLSLGDDL MRLFNGERVQ
MIMNRLNLPD DQPIEHKMVT KAIQSAQGQL EQQNFEIRKN VLKYDEVLNR QRQVIYAERR
KVLEGADLRE QVRSMIDDVL DSYVRSATAE GDPEDWDLEH LWTAFSQIFP VSFTADQLIE
ENGGDISVLT PDIISQRVRE DAHEVYDRRE AEIGEETMRE VERQVILQVM DRKWREHLYE
MDYLQEGIGL RAMAQRNPLI EYQREGYDMF QEMLEGIKEE SIRFLFNVEV RVNQPQESQI
TAASAAATAS AIPLVAPEAE KTEDKAEDAQ EAEESAASAE AAESAKDTAQ DKDAESVAKK
AQAVVPALGK EEKQPEKLQY SGPSEGGGVE KRTEDTGPDY ANTPRNAPCP CGSGKKYKKC
HGAPKSRV
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