Gene Tfu_2476 details

Gene Information

• Locus tag: Tfu_2476
• Symbol: smpB
• ID: 3580584
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 2914765
• End bp: 2915247
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637686192
• Product: SsrA-binding protein
• Protein accession: YP_290532
• Protein GI: 72162875
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.472283
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGGA AGAAAAAACA GGACAAGGGG CAGGGACCGA AGACCATCGC GCAGAACCGG 
CGCGCCCGGC ACGACTACCA CATCGAAGAC ACCTATGAGG CCGGTCTGGT GCTGACCGGT 
ACCGAGGTGA AGTCGCTGCG TGCCGGCCGT GCCTCCCTGG TCGACGGTTT CGCCCAGATC 
AAGAACGGCG AGGTCTGGCT GCACAACGTG CACATCCCCG AGTACACGAT GGGGACGTGG 
ACGAACCACG CTCCGCGTCG CCCGCGTAAG CTCCTGTTGC ACCGGGAGGA GATCGCGAAG 
CTGGACGCGA AGACCCGCGA GGCGGGCCGC ACGCTGGTCC CGCTGTCGCT CTACTTCCGG 
AACGGCCGGG CCAAGGTCGA GATCGCTCTG GCCCGAGGCA AGCGCGAGTA CGACAAACGC 
CACGACATCG CCGAACGCGA GGCTAAGCGC GAAATGGAAA GAGCTCTGCG TCGGCGGCGT 
TGA 

 

Protein sequence

MARKKKQDKG QGPKTIAQNR RARHDYHIED TYEAGLVLTG TEVKSLRAGR ASLVDGFAQI 
KNGEVWLHNV HIPEYTMGTW TNHAPRRPRK LLLHREEIAK LDAKTREAGR TLVPLSLYFR 
NGRAKVEIAL ARGKREYDKR HDIAEREAKR EMERALRRRR