| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2452 |
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| Symbol | sdhA |
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| ID | 3581871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2881162 |
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| End bp | 2883102 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686168 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_290508 |
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| Protein GI | 72162851 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.924781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC TTTACACCGA GGGCGCTCCG ATCCGCGACG AGAAGGCCCC GGACGGGCCG
ATCGCGGAGC GCTGGGACAA GCGCCGCTTC TCCGCACGAC TGGTGAACCC AGCGAACCGG
CGCAAGCTCT CGATCATCAT CGTGGGTACC GGTCTGGCTG GCGCCTCCGC GGCGGCCACC
CTGGGCGAGG CCGGGTACAA CATCAAGTCG TTCTGCTACC AGGACAGCCC GCGGCGCGCG
CACAGCATTG CCGCGCAGGG CGGCATCAAC GCGGCGAAGA ACTACCGCAA CGACGGGGAC
AGCATCTACC GGCTGTTCTA CGACACCGTC AAAGGCGGCG ACTACCGGGC CCGCGAATCC
AACGTCTACC GGCTGGCCCA GGTCAGCGTC GAGATCATCG ACCAGTGCGT GGCCCAGGGC
GTGCCTTTCG CCCGCGAATA CGGCGGTCTG CTCGACAACC GCTCCTTCGG CGGTGTGCAG
GTCTCCCGCA CCTTCTACGC CCGCGGCCAG ACGGGGCAGC AGCTGCTGCT CGGTGCCTAC
CAGGCGCTGG AACGGCAGGT CGCGGCGGGC ACGGTGGAGA TGTACACCCG CCACGAGATG
CTGGACCTCA TCGTCGTCGA CGGCCGGGCG CGCGGCATCA TCGTGCGCGA CATGGTCACC
GGTGAGATCG AGACCCACTT CGCGGACGCG GTCGTCCTCG CCACCGGTGG CTACGGCAAC
GTGTTCTTCC TGTCCACCAA CGCGATGGGC AGCAACGTCA CGGCGATCTG GCGGGCCCAC
CGCAAGGGCG CGTTCTTCGC CAACCCCTGC TTCACGCAGA TCCACCCGAC GTGCATCCCG
GTCAGCGGCA CCTACCAGTC CAAGCTGACC CTGATGAGCG AGTCGCTCCG CAACGACGGC
CGGATCTGGG TGCCGAAGAA GAAGGGTGAC ACGCGCGACC CGCGGGACAT CCCCGAAGAG
GAGCGCGACT ACTACCTGGA GCGCATGTAC CCGGCCTTCG GCAACCTGGT GCCGCGCGAC
ATCGCTTCGC GGGCCGCCAA GCGGGTCTGC GACGAAGGAC GCGGGGTCGG CCCCGGCGGC
CTGGGCGTCT ACCTGGACTT CGCTGACGCC ATCAAGCGGA TGGGGCGCGA CGCGGTCGAA
GCCAAGTACG GCAACCTGTT CGACATGTAC GAGCGCATCA CCGGGGAGAA CCCGTACGAG
GTCCCCATGC GGATCTACCC GGCGGTGCAC TACACCATGG GCGGACTGTG GGTCGACTAC
GACCTGCAGA GCACCATCCC CGGCCTGTTC GTGATCGGTG AGGCCAACTT CTCCGATCAC
GGCGCCAACC GGCTGGGCGC CAGCGCGCTC ATGCAGGGCC TGGCCGACGG CTACTTCGTG
CTGCCCAACA CCATCAACGA CTACCTGGCC GACGGACCCT TCGAGAAGAT CGACGAGAAC
CACCCGGAGG TCAAGGAGGC AGTCGAGGGC GTGCGCGCCC GCCTCGAGAA GCTGCTGTCC
ATCAACGGCA GCCGCACCGT GGACTCCTTC CACCGCGAGC TCGGCAAGAT CATGTGGGAC
TACTGCGGTA TGGAGCGCAC GGAGGAAGGG CTGCGCAAGG CGATCACGCT CATCCGCGAG
CTGCGGGACG AGTTCTGGCG TGACGTCAAG GTCACCGGCG TCAACGAAGA ACTCAACCAG
ACCCTGGAGC GGGCTCACCG AGTCGCCGAC TTCATGGAAC TGGCGGAACT GATGTGCATC
GACGCGCTGC ACCGCCGCGA GTCCTGCGGT GGCCACTTCC GCGCCGAAAG CCAGACCGAA
GACGGCGAGG CGCTGCGTCA TGACGACGAG TTCGCCTATG TCGCAGCGTG GGAGTTCACC
GGCGTGGGTG AACCGCCCGT GCTGCACAAG GAAGCCCTGG AATACGAGTA CGTCGAGATG
AAGCAGCGGA GCTACAAGTG A
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| Protein sequence | MTELYTEGAP IRDEKAPDGP IAERWDKRRF SARLVNPANR RKLSIIIVGT GLAGASAAAT
LGEAGYNIKS FCYQDSPRRA HSIAAQGGIN AAKNYRNDGD SIYRLFYDTV KGGDYRARES
NVYRLAQVSV EIIDQCVAQG VPFAREYGGL LDNRSFGGVQ VSRTFYARGQ TGQQLLLGAY
QALERQVAAG TVEMYTRHEM LDLIVVDGRA RGIIVRDMVT GEIETHFADA VVLATGGYGN
VFFLSTNAMG SNVTAIWRAH RKGAFFANPC FTQIHPTCIP VSGTYQSKLT LMSESLRNDG
RIWVPKKKGD TRDPRDIPEE ERDYYLERMY PAFGNLVPRD IASRAAKRVC DEGRGVGPGG
LGVYLDFADA IKRMGRDAVE AKYGNLFDMY ERITGENPYE VPMRIYPAVH YTMGGLWVDY
DLQSTIPGLF VIGEANFSDH GANRLGASAL MQGLADGYFV LPNTINDYLA DGPFEKIDEN
HPEVKEAVEG VRARLEKLLS INGSRTVDSF HRELGKIMWD YCGMERTEEG LRKAITLIRE
LRDEFWRDVK VTGVNEELNQ TLERAHRVAD FMELAELMCI DALHRRESCG GHFRAESQTE
DGEALRHDDE FAYVAAWEFT GVGEPPVLHK EALEYEYVEM KQRSYK
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