| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2425 |
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| Symbol | |
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| ID | 3580264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2846553 |
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| End bp | 2847938 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637686140 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_290481 |
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| Protein GI | 72162824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.131973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTT ACGCCCATCC CGCCGGACCG CGCCACGCGG ACGTGCTGCC TGAGGAACAC
CCACCCAGCC CTCCGGCGGA CCTCCTCGAG CTCCACCCCC GCGTCTGGCC GAGCACAGCC
ACCCGAGTCG ACGGCGAGAT CACCATCGGC GGTGTCGGCG TCACCGAACT CGCCCGGAAA
TTCGGCACCC CGCTCTACGT CATCGACGAA GCAGACTTCC GGGCCCGCGC CCGCGACTAC
CGTCTCGCCT TCGAGGACGC CGACGTCTAC TACGCGGGCA AGGCCCTGCT CACCAAGGCG
GTGGCCCGCT GGGTGGCCGA GGAAGGGCTC AAACTCGACG TGTGCACCGG CGGCGAGCTC
GCTGTCGCCC TGGCCGCGGG GTTCCCGCCC GAGCGGATCG GCATGCACGG CAACAACAAG
TCCGCGGCCG AACTGGCCCG GGCCGTCGAA GTCGGCGTCG GACGGATCAT CATCGACTCC
TTCGACGAGA TCGACCGGCT GGAGCGGATC GCCGCGGAGC GAGGCCGTGT CCCCGAAGTG
CTGATCCGTG TCACCACCGG CGTGGAGGCA CACACCCACG AGTTCGTCGC CACCGCCCAC
GACGACCAGA AGTTCGGGCT GTCCCTCAGC AACGGGGCGG CTGCCGAGGC GGTGCGCCGC
CTGCTCACCT CCCCGCACCT GCGCCTCGTC GGGCTCCACT CCCACATCGG ATCGCAGATC
TTCGACACCG CAGGCTTCGA AGTCGCCGCG CGCCGTCTCA GCACCTTCCT CACCCAGATC
TACGCTGAAC ACGGGATCTC CCTCCCCGAA CTCGACCTCG GGGGCGGGCT GGGGATCGCT
TACCTCCCCG ACGACGACCC GCTGGACCCC AAGAGCATCG CGGACAGCCT GCGGTCGATC
GTCGAACACG AATGCGCCGC CCAGAACCTG CCGGTGCCGC GGATCGCGGT CGAACCCGGC
CGCGCCATCG CCGGACCGGC GGGCATCACC CTCTACGAGG TCGGCACGGT CAAGGACGTG
GAGGGGATCC GCACCTATGT CAGTGTCGAC GGCGGTATGA GCGACAACAT CCGCACCGCG
CTGTACGGTG CGGAGTACAC CTGTGTGCTG GCCTCGCGGC ACAGCGACGC CGAGCCGATG
CTGTCCCGCC TGGTCGGCAA GCACTGCGAG AGCGGCGACA TCGTCGTGCG CGACCTCTAC
CTCCCTGCCG ACCTGCGTCC CGGCGACCTG GTAGCAGTGG CCGCCACCGG CGCCTACTGC
TACTCCATGG CCAGCAACTA CAACCACGTG CCCCGGCCTG CCGTGGTCGC GGTCCGCGAG
AAGAACGCCC GCGTCCTGGT GCGACGGGAA ACCGAAGAAG ACCTGTTGCG GCTGGACGTA
GGCTGA
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| Protein sequence | MSRYAHPAGP RHADVLPEEH PPSPPADLLE LHPRVWPSTA TRVDGEITIG GVGVTELARK
FGTPLYVIDE ADFRARARDY RLAFEDADVY YAGKALLTKA VARWVAEEGL KLDVCTGGEL
AVALAAGFPP ERIGMHGNNK SAAELARAVE VGVGRIIIDS FDEIDRLERI AAERGRVPEV
LIRVTTGVEA HTHEFVATAH DDQKFGLSLS NGAAAEAVRR LLTSPHLRLV GLHSHIGSQI
FDTAGFEVAA RRLSTFLTQI YAEHGISLPE LDLGGGLGIA YLPDDDPLDP KSIADSLRSI
VEHECAAQNL PVPRIAVEPG RAIAGPAGIT LYEVGTVKDV EGIRTYVSVD GGMSDNIRTA
LYGAEYTCVL ASRHSDAEPM LSRLVGKHCE SGDIVVRDLY LPADLRPGDL VAVAATGAYC
YSMASNYNHV PRPAVVAVRE KNARVLVRRE TEEDLLRLDV G
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