Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2395 |
Symbol | |
ID | 3580669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 2817712 |
End bp | 2818155 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637686110 |
Product | methylmalonyl-CoA epimerase |
Protein accession | YP_290451 |
Protein GI | 72162794 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.754558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCACTC GCATCGACCA CATCGGTATC GCCTGCCGGA ATCTCGACGA AGCCATCCGC TTCTACCGGG AGACCTACGG CTTTGAGGTG ACCCACGAGG AGGTCAACGA AGAGCAGGGG GTCCGGGAGG CGATGCTGCG GATCAACGGG ACGGACGACG GCGGGGCGAG CTACCTGCAG CTCCTGGAGC CGATCTGCGA CGACTCTCCG GTCGCGAAGT TCCTGGAGCG CCACGGGGAG GGCGTGCACC ACATCGCGTT CGGCACCGCG GACGTGGCGG AGGCCGCTGC GACGGTCCGG GAACGCGGTG TCCGTGTACT CTACGAAACT CCGCGCAACG GCTCGATGGG ATCGTTGATC ACTTTCTTGC ACCCGAAAGA CTGTGGCGGG GTGCTCACTG AATTGGTTCA GGCGCGGACG GACGGTGCTC CGTCGGCAGA GTAA
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Protein sequence | MFTRIDHIGI ACRNLDEAIR FYRETYGFEV THEEVNEEQG VREAMLRING TDDGGASYLQ LLEPICDDSP VAKFLERHGE GVHHIAFGTA DVAEAAATVR ERGVRVLYET PRNGSMGSLI TFLHPKDCGG VLTELVQART DGAPSAE
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