Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2385 |
Symbol | |
ID | 3581139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2808149 |
End bp | 2809252 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637686100 |
Product | FecCD-family membrane transport protein |
Protein accession | YP_290441 |
Protein GI | 72162784 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.567541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTCG CCGCCAAGCA GGCGGACCCG CTCCCCGCTT CCCGCCCCGA CAGCACCCAG GTCCGCCGCG CCACCGTGCT GCGCGGCACC GTCCTGCTGA CCGTCCTCGC CATCGCCCTC GGCGCCGTGG CCCTCGTCGC CGCGGGCATC GGCGCCTACC ACATTCCCCC GCTCGAAGTC GCCGGATCGG TCTTCCGCGG CCTGGGCCTC GACTGGGGTG AGGCCGCCGA CCCGCTCGCC GACGAGGTGC TGTGGAACGT CCGCTTCCCC CGCGTCGTCC TCGCCATGAT CGTCGGTTCT TCCCTGGCGC TCGCCGGGGC CATGATGCAG GGCATCTTCG GCAACCCGCT CGCCGAGCCC GGCGTCATCG GGGTCTCCTC AGGCGCCACC GTGGGCGCGG TCCTCATCAT CGCGCTCGGC GCTTCCGCGC TGGGGTACTG GACGGTCATC GTCGCGTCCT TCCTCAGCGG GATGGTCACC ACCGTGCTCG TCTACGTGCT GTCCCGCTCG GGGGGACGCA CCGAGGTCGT CACCCTGCTG CTCACCGGGA TCGCGGTCAA CGCGGTCGCC GGGGCGCTCA TCGGCGCCGC CACCTACTTC TCCGAAGACG CGGAACTGCG GTCGATCACC AACTGGCAGA TGGGCAGCTT GGCCGCGGCC ACCTGGTTCA AAGTGGCCGC CGCGCTGCCG CTGGCCGTGG CGGGGATCAT CGCGGCACCG TTCTTCGCCC GCCGCCTCGA CTTGCTCTCC CTCGGCGAAA GCCCGGCCCG CCACCTGGGC GTCGACGTAG AGCGGATGCG CCAGGCGCTG ATCGTCGTCA TCGCGATGCT CACCTCGTCT GCCGTGGCGT TCGCCGGGAT CATCAGCTTC GTCGGCCTGG TCGTGCCCCA CATGGTGCGG ATGATCGCCG GGCCGGGGCA CCGCGTACTG CTCCCAGCGA GCGTGCTGGG CGGCGCCCTC GTCCTCGTCG CCGCGGACCT GGTCGCCCGG GTCGCTGCCG CCCCCCAGGA GGTGCCTTTG GGCATCATCA CCGCACTGGT CGGCGGCCCG TTCTTCTTCT GGCTGCTGTA CCGGACCCGC GCCAGACAGG GAGGTTGGGC ATGA
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Protein sequence | MTLAAKQADP LPASRPDSTQ VRRATVLRGT VLLTVLAIAL GAVALVAAGI GAYHIPPLEV AGSVFRGLGL DWGEAADPLA DEVLWNVRFP RVVLAMIVGS SLALAGAMMQ GIFGNPLAEP GVIGVSSGAT VGAVLIIALG ASALGYWTVI VASFLSGMVT TVLVYVLSRS GGRTEVVTLL LTGIAVNAVA GALIGAATYF SEDAELRSIT NWQMGSLAAA TWFKVAAALP LAVAGIIAAP FFARRLDLLS LGESPARHLG VDVERMRQAL IVVIAMLTSS AVAFAGIISF VGLVVPHMVR MIAGPGHRVL LPASVLGGAL VLVAADLVAR VAAAPQEVPL GIITALVGGP FFFWLLYRTR ARQGGWA
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