| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2287 |
|---|
| Symbol | |
|---|
| ID | 3579126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2689659 |
|---|
| End bp | 2690900 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637685996 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_290343 |
|---|
| Protein GI | 72162686 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.10433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGGG CTCTAGCTGC CCGACCATTT TCCTGCCTAC GATCTCGCCG TTCCACGAAC
CTGTGCCGCA GGCAGGATTG GGCCGTTCCG ATAACGCGAG GTGATCGCAC CGTGCGCTTG
AGACCGCCGC CTCCGCAAGA GGACACCGGC GCTGGATATG TAGAGTACGG CGGGGTCGTG
GCGCTGATCG CGGTGATTGC CACCGTGCTC TTTTTTGCGT GGGGAGGAAT TGCGGCCACG
GTCCGCGACG GAGCAACCGG GGCAGTGTGC CGGATCCTTG ATTCAGCGGA CTGCGAGACC
GAGACAGCGG GACACACGAC GTCCGGAAGT GAGGCGCCGC TCTACTCAAC GGTTCAAGCC
AACGGTCCCG GCGCGGGCAT CACCCCGCTC CAGGATTCCC CGCCACAGGA CTGCGCCCCC
GGCGGACTGG GGGTAGACCA CGACCGCCGG GACACGGCTC GGGACGCCCG GAGGGCGGAC
AACGACCGCG AGCGGCGCAA CGGCAGTCCA GAGGAAACCA CAGGCACCTG CGGGCCTTCC
CCCCACCAGC CCAGCGGTTT AGGCGACCCA GTACCGGGCG AACAGGCCCC GGTCCCTGAG
CCTCCCGCCT GGGAGCCAGT CGATGAAGGA GCCGGGGAAT GGGGGTCGGA AGACTCCCTC
GCCAGCCAAG CAAAGGCGCG CTTGATGCGC GCACTGGCGG AGAGCGCCGC CAATGCGATG
GCCGGAAAGT GGCCGAACGC CTCCCGCAAC CTGCTGCATT TCCTTAGCAA CAGCGGCGAA
CCCTTGGAAC AGGACGTGGA CCAGATGCTG AATGACGTCC CACAATTCCG TGATGAGGTC
GACACCACGC TAGAGAACCT CGCGGCTACC GCTATCGCCC AGGCCCAAGC CGAAGGGGTT
GACGGTCCCG TCACTTTTCC TGTCAACACC GCGTGGACAG GTTTCTACAT CTCCCCCTCG
TACTCGCGAG ACTGGTTCTT TGCGCTGGGG GGAATCCAGT ACAACGTCAC AGGACAGATC
ACCGTCTATC CTCCGAGTGA ACCCGGCGGT GAATGGCGTT ACGAGAGCAG GACCCGGGTC
AATATCCGCG ACCAGTACAA CTGGGATGGC GGAAAAAGCA CCCAGATCGG ACCCTTTACC
GTGAGCGACG AGACTTTGGC TGAGATGCAC CGGGTCGGGA TTGCCCGGGA GTACCTGGCC
TACGGGCAGT CCCAGGAAGA GATTCGGGAA GGAACCTTCT GA
|
|---|
| Protein sequence | MPGALAARPF SCLRSRRSTN LCRRQDWAVP ITRGDRTVRL RPPPPQEDTG AGYVEYGGVV
ALIAVIATVL FFAWGGIAAT VRDGATGAVC RILDSADCET ETAGHTTSGS EAPLYSTVQA
NGPGAGITPL QDSPPQDCAP GGLGVDHDRR DTARDARRAD NDRERRNGSP EETTGTCGPS
PHQPSGLGDP VPGEQAPVPE PPAWEPVDEG AGEWGSEDSL ASQAKARLMR ALAESAANAM
AGKWPNASRN LLHFLSNSGE PLEQDVDQML NDVPQFRDEV DTTLENLAAT AIAQAQAEGV
DGPVTFPVNT AWTGFYISPS YSRDWFFALG GIQYNVTGQI TVYPPSEPGG EWRYESRTRV
NIRDQYNWDG GKSTQIGPFT VSDETLAEMH RVGIAREYLA YGQSQEEIRE GTF
|
|---|
| |