Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2262 |
Symbol | |
ID | 3581483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2664309 |
End bp | 2665475 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637685970 |
Product | cell wall-associated hydrolase (invasion-associated proteins) |
Protein accession | YP_290318 |
Protein GI | 72162661 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGTA CGAGCACCAC CGCGGTGTTC GTCGCAGCTC TCGGTGCTTT GAGCTCCCCT GCATGGGCTG AGCCTCATCC TGATGTGGCG GACCGGCCCC CCGTCACCGC TCCGTTCTCC CCCCGAGCAG CCACTCCTTC GGGATCCGGC ACCTATCCTT CCCCTCCTGT CGCCGACGCG GACCGGCTCG AGCGCACGAT CCGGGTCGCG CCGTTCGACG AACCGCGCTC TCGGGAGTAC TTCGCGGTCT CCGCTGTGTC TCTGGACCGC GAACTCATCG ACAAGGTCCG AGAGATCGAC GGGGTACGGT CTGTCGAAGT GGTGGATGCC GCACGGATCA AGGTCGACGG CGTGACCATG TCCGTACTGG GCGTGAACCC CTCCACTTTC CGCAACTATG CTCCGCTCCC TTCCGCCAAG TCCGACGAGA TCTGGCAGGG CATCGCTGAA GGGCGGATCG CGCTTTCCAA CGACGCGGGC ACCCAGCGGG ACCTGAAACT GGGCAGCACG GTGGCCATGG CCGGTGCGCA GGGGACGGTG GACAAGGAAG TGTGGACCCA CGCCACCTCG GGGGTGGCTG GGATCGACGC GCTCATCTCC CGTGCCTCTG CCGCGGAACT GGGATTCCCT CGGGGGAACG GGCTGATCGT ATCGGCCCCC GGCGCAGACT TGTGGCAGCT CCGCGAGGAT TTGAGGAAGG TCCTCGGCTC GGACATCAGC CTGCAGGTGC TGGCTGAGGA GGATCCCGGA CCGCGGAGGT ACGACGCGGA AGGGGTCCCG GTCAGCGAAG AGGTCATCGA GAGGATGATC GCTGCGGCCG AGAGTCAGTT GGGTGTGCCC TACGTGTGGG GCGGCACCAC TCCGGGGAAG GGTTTTGACT GCTCTGGCCT GGTGCAGTGG GCTTTCCGCC AGGCAGGGGT GGAGATCCCC CGCGTCACCC ACGACCAGTG GTGGACGGGT GAGCACCTCG ACTACTCCGA GGCCCGCCGC GGTGACCTGC TCTTTTGGCG CACTGACCCG ACAGCTCCCG ACTACATCTC CCACGTAGCG ATCTACTTGG GGAACGGGAA GATGCTGGAG GCGCCGCGGA CCGGCGACGT TGTCAAGATC ACCGACGTCC GTTTGGACAA GATGGCCGGA GTGGTCCGCG TCCACGTGGC TGAGTAG
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Protein sequence | MAGTSTTAVF VAALGALSSP AWAEPHPDVA DRPPVTAPFS PRAATPSGSG TYPSPPVADA DRLERTIRVA PFDEPRSREY FAVSAVSLDR ELIDKVREID GVRSVEVVDA ARIKVDGVTM SVLGVNPSTF RNYAPLPSAK SDEIWQGIAE GRIALSNDAG TQRDLKLGST VAMAGAQGTV DKEVWTHATS GVAGIDALIS RASAAELGFP RGNGLIVSAP GADLWQLRED LRKVLGSDIS LQVLAEEDPG PRRYDAEGVP VSEEVIERMI AAAESQLGVP YVWGGTTPGK GFDCSGLVQW AFRQAGVEIP RVTHDQWWTG EHLDYSEARR GDLLFWRTDP TAPDYISHVA IYLGNGKMLE APRTGDVVKI TDVRLDKMAG VVRVHVAE
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