Gene Tfu_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2262 
Symbol 
ID3581483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2664309 
End bp2665475 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID637685970 
Productcell wall-associated hydrolase (invasion-associated proteins) 
Protein accessionYP_290318 
Protein GI72162661 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTA CGAGCACCAC CGCGGTGTTC GTCGCAGCTC TCGGTGCTTT GAGCTCCCCT 
GCATGGGCTG AGCCTCATCC TGATGTGGCG GACCGGCCCC CCGTCACCGC TCCGTTCTCC
CCCCGAGCAG CCACTCCTTC GGGATCCGGC ACCTATCCTT CCCCTCCTGT CGCCGACGCG
GACCGGCTCG AGCGCACGAT CCGGGTCGCG CCGTTCGACG AACCGCGCTC TCGGGAGTAC
TTCGCGGTCT CCGCTGTGTC TCTGGACCGC GAACTCATCG ACAAGGTCCG AGAGATCGAC
GGGGTACGGT CTGTCGAAGT GGTGGATGCC GCACGGATCA AGGTCGACGG CGTGACCATG
TCCGTACTGG GCGTGAACCC CTCCACTTTC CGCAACTATG CTCCGCTCCC TTCCGCCAAG
TCCGACGAGA TCTGGCAGGG CATCGCTGAA GGGCGGATCG CGCTTTCCAA CGACGCGGGC
ACCCAGCGGG ACCTGAAACT GGGCAGCACG GTGGCCATGG CCGGTGCGCA GGGGACGGTG
GACAAGGAAG TGTGGACCCA CGCCACCTCG GGGGTGGCTG GGATCGACGC GCTCATCTCC
CGTGCCTCTG CCGCGGAACT GGGATTCCCT CGGGGGAACG GGCTGATCGT ATCGGCCCCC
GGCGCAGACT TGTGGCAGCT CCGCGAGGAT TTGAGGAAGG TCCTCGGCTC GGACATCAGC
CTGCAGGTGC TGGCTGAGGA GGATCCCGGA CCGCGGAGGT ACGACGCGGA AGGGGTCCCG
GTCAGCGAAG AGGTCATCGA GAGGATGATC GCTGCGGCCG AGAGTCAGTT GGGTGTGCCC
TACGTGTGGG GCGGCACCAC TCCGGGGAAG GGTTTTGACT GCTCTGGCCT GGTGCAGTGG
GCTTTCCGCC AGGCAGGGGT GGAGATCCCC CGCGTCACCC ACGACCAGTG GTGGACGGGT
GAGCACCTCG ACTACTCCGA GGCCCGCCGC GGTGACCTGC TCTTTTGGCG CACTGACCCG
ACAGCTCCCG ACTACATCTC CCACGTAGCG ATCTACTTGG GGAACGGGAA GATGCTGGAG
GCGCCGCGGA CCGGCGACGT TGTCAAGATC ACCGACGTCC GTTTGGACAA GATGGCCGGA
GTGGTCCGCG TCCACGTGGC TGAGTAG
 
Protein sequence
MAGTSTTAVF VAALGALSSP AWAEPHPDVA DRPPVTAPFS PRAATPSGSG TYPSPPVADA 
DRLERTIRVA PFDEPRSREY FAVSAVSLDR ELIDKVREID GVRSVEVVDA ARIKVDGVTM
SVLGVNPSTF RNYAPLPSAK SDEIWQGIAE GRIALSNDAG TQRDLKLGST VAMAGAQGTV
DKEVWTHATS GVAGIDALIS RASAAELGFP RGNGLIVSAP GADLWQLRED LRKVLGSDIS
LQVLAEEDPG PRRYDAEGVP VSEEVIERMI AAAESQLGVP YVWGGTTPGK GFDCSGLVQW
AFRQAGVEIP RVTHDQWWTG EHLDYSEARR GDLLFWRTDP TAPDYISHVA IYLGNGKMLE
APRTGDVVKI TDVRLDKMAG VVRVHVAE